Pseudomonas sp. URHB0015, N526_RS0111090
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. URHB0015 N526DRAFT_scaffold00008.8_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CATCCGCCCCCAACTCATCCGCTACCATACTGGCCATACGCCCGCCCATTGACTTGCCGCCGATGGCCAGCGGCCCAGCGACATGGCGTCGCACCACCCC ATAGACTTCCCGCCAGTGCTCGAGCAACTTTGGTGTGGTGTTCGGCGGACGCTTGCCGCCGTCCAGACGTCGCTGCGCCATGTAAGGAAACTCGAAGCGC AGCACGTTGATCCCAAGCGCAGCGAGGCGTGCAGCGAAATTCGTCATGAATCCGCTGTCCATCGGTGCGCCGGAACCGTGGGCCAAAATCAGGGTTGGCG TTTGCTTCGAAACCTTGCCAGCCGCCGCATCCCACAGCCAGCCATTGTCCCGCACACACTGCGCCCATTGATCCCCGTCAATACTGGCGTTGTGCTCATT GTCCATGCTTGCCTCGCTTTTAATCTGCCTATAACTCCAGGCGAAGGGAGAGTCGCTGCCTTGCAGTCGCTCGCTTCGGCTGAACCGTGGATGGGGAACC
|
|
| DNA Sequence for Gene |
>N526_RS0111090
ATGAACACTTCTACAAGTACCGCCTATAACTACAAGGTGGTCCGCCAATTCGCCATTATGACGGTGGTCTGGGGCATCGTCGGCATGGGCCTCGGGGTTT TTCTCGCGGCGCAATTGGTCTGGCCCGAACTGAACTTCAACTTGCCGTGGACCAGCTTCGGTCGCCTACGCCCGCTGCACACCAACGCGGTGATCTTCGC CTTTGGTGGCTGCGCGCTGTTCGCCGCCTCGTTCTACTCGGTACAACGGACCTGCCAAACCCAACTGTTTGCGCCGAAAATCGCCGCGTTCACGTTCTGG GGCTGGCAACTGGTGATTCTGCTGGCAGCCATCACCCTGCCACTGGGCTACACCAGTTCCAAGGAGTACGCCGAACTGGAGTGGCCGATCGATATCCTGA TCACCATCGTCTGGGTCGCCTACGCCATCGTATTCTTCGGCACGCTGATGAAGCGCAAGACCAAGCACATCTACGTCGGCAACTGGTTCTTCGGCGCCTT CATCATCACCGTCGCCATCCTGCACATCGTCAACAACATGGAACTGCCGGTCAGCCTGACCAAGTCCTACTCGGTGTATGCCGGTGCGACCGATGCCATG GTGCAGTGGTGGTACGGACATAACGCGGTAGGCTTTTTCCTAACCGCTGGCTTCCTCGGGATGATGTACTACTTCGTGCCGAAACAGGCCGAACGTCCGG TGTACTCGTATCGCCTGTCGATCGTGCACTTCTGGGCGCTGATCACCCTGTACATCTGGGCCGGCCCGCACCACCTGCACTACACCGCGCTGCCAGACTG GGCGCAGTCGCTGGGCATGGTGATGTCGCTGATCCTCCTGGCTCCGAGCTGGGGCGGCATGATCAACGGCATGATGACCCTCTCGGGTGCTTGGCATAAG CTGCGCAGCGACCCGATCCTGCGTTTCCTCGTGGTATCCCTGGCGTTCTACGGCATGTCGACCTTCGAAGGTCCGATGATGGCGATCAAGACCGTCAACG CCCTCTCCCACTATACCGACTGGACCATCGGCCACGTTCACGCCGGCGCGCTCGGCTGGGTGGCAATGATCTCGATTGGTGCGCTGTACCACATGATCCC GAAAATCTTCGGGCGTGCGCAGATGCACAGCATCGGCCTGATCAATGCGCACTTCTGGCTGGCCACTATCGGCACCGTGCTCTACATCGCCTCGATGTGG GTCAACGGCATCGCCCAGGGCCTGATGTGGCGTGCAGTCAACGAAGACGGGACCCTGACCTACTCCTTCGTCGAAACCCTGGTGGCCAGCCACCCAGGCT TCGTCGTGCGTCTGGTCGGCGGCGCGATCTTCTTCAGCGGCATGTTGCTGATGGCCTACAACACCTGGCGCACCGTGCGTGAAGCCCAACCTGCCGAAGT CGCCGCCGCGGCGCAGATGGCCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GGAGTCCGCCATGAAACACGAAACGATTGAGAAAAACGTCGGCCTGCTCCTGCTGCTGATGGTGTTTGCGGTGAGCATCGGCGGTCTGACCCAGATCGTC CCGCTGTTCTTCCAGGACGTCACCAACAAGCCGGTCGAAGGCATGAAGCCTTACACCGCGCTGCAACTCGAAGGCCGCGACATTTACATCCGCGAAGGCT GCGTTGGCTGTCACTCGCAGATGATCCGGCCGTTCCGCGCCGAGACCGAGCGTTATGGCCACTACTCGGTGGCCGGTGAAAGCGTCTGGGACCACCCGTT CCTCTGGGGCTCCAAGCGTACCGGTCCGGACCTGGCCCGCGTCGGCGCCCGCTACTCCGATGACTGGCACCGCGCGCACCTGTACAACCCGCGCAACGTG GTGCCCGAGTCGAAGATGCCCGCCTACCCGTGGCTGGTGGCCAATCAGCTCGACAGCAGTCACACCGAGACCAAGATCAAGGCCATGCGCACCCTCGGCG
|
|
| Amino Acid Sequence |
>cbb3-type cytochrome c oxidase subunit I
MNTSTSTAYNYKVVRQFAIMTVVWGIVGMGLGVFLAAQLVWPELNFNLPWTSFGRLRPLHTNAVIFAFGGCALFAASFYSVQRTCQTQLFAPKIAAFTFW GWQLVILLAAITLPLGYTSSKEYAELEWPIDILITIVWVAYAIVFFGTLMKRKTKHIYVGNWFFGAFIITVAILHIVNNMELPVSLTKSYSVYAGATDAM VQWWYGHNAVGFFLTAGFLGMMYYFVPKQAERPVYSYRLSIVHFWALITLYIWAGPHHLHYTALPDWAQSLGMVMSLILLAPSWGGMINGMMTLSGAWHK LRSDPILRFLVVSLAFYGMSTFEGPMMAIKTVNALSHYTDWTIGHVHAGALGWVAMISIGALYHMIPKIFGRAQMHSIGLINAHFWLATIGTVLYIASMW VNGIAQGLMWRAVNEDGTLTYSFVETLVASHPGFVVRLVGGAIFFSGMLLMAYNTWRTVREAQPAEVAAAAQMA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|