Pseudomonas sp. URHB0015, N526_RS0110905
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. URHB0015 N526DRAFT_scaffold00008.8_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GGCATGATCCATGGGCGCGGCTTTCAGGGCTGTCGGCGTGAGCGCACCGGATTCTTGCATCTTGAGCATTTCCACCTGGTGTGCGGCGTGCATCGCCGTG TCGCCCAGGTTGAACTCGTGGAGCAATTGGCCTTTATTGATCAGCACAAAGCGAATGGTTTCGCCGGCCTTGATCTGCAGCGCCTTTGGATTGAAAGACA TATCGCCCATGACGATTTCTACCGTTCTTGTCGCCTTGGCCGCCGGTGCCGGCGCGCCGAATGCGTAGCTCTGGGCTGGCGAAGCCAACACCGGGAAGCT CAACGCCAACAGGCAGCCCGCAAGGATCAATCGATTGCGCAAAAACATGGTCATACTCCAACAAGAAGAGGTTCAGCCTGTGGGAAACTCTAGGGCCGTG GCGCTGCCAGTTGGCTGACGCGCAGATTACAACTTTGTCAGGTTGCACGGCAGGCACGCTCTGCGCGCTATAAAGCAACCGTCCCCCCCCAGAGCCGCCC
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| DNA Sequence for Gene |
>N526_RS0110905
ATGAAACTGCTGATCGTCGAAGACCAACCGAAAACCGGCCACTATTTGCGCCAGGGCCTGAGCGAGGCCGGGTTCAATGTCGAACTGGTGGCGGACGGCA ACACTGGCCAGCTCCTGGCCCTGACCGGCGATTATGCGCTGCTGATCCTCGATGTGATGCTACCCGGGCGCGACGGTTGGCAGATTCTGCAAGCGGTGCG CAATGCCGGACTGGAGATCCCGGTGCTGTTCCTGACGGCGCGGGACGCAGTCGAAGATCGTGTACATGGCCTGGAGTTGGGAGCCGACGACTATCTGGTC AAACCCTTTGCCTTCTCAGAGCTGCTGGCCCGGGTCCGCAGCCTGTTGCGCCGTGGCAGCGTAACGCCACAGGAAACCAGCCTGCACCTGGCGGACCTGC GCCTGGACCTGATTCGCCGCCGGGTCGAACGCAACGGCCAGCGCATCGACCTCACCGCCAAGGAGTTCGCCCTGCTGGAGCTACTCCTGCGCCGCCAGGG TGAAGTGCTACCCAAGTCGTTGATCGCTTCGCAGGTTTGGGACATGAATTTCGACAGCGACACCAACGTCATCGAAGTGGCTATCCGCCGCTTGCGCCTG AAGATCGACGACGATTTCCCCGACAAGCTGATTCACACCGTGCGCGGCATGGGCTATGTGCTCGAAGAGCGCCAAGCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TGCGCCGCCTGTCCCTCGGTAGCCGCCTGGCCCTGCTGTTTGCTGCCTGCACCGCAGTGGTCTCGCTGATCGCCGGATTGCTGTTCAGTCGCGCCAGCGA AAGCCACTTCCTGGAGCTTGACCAGCAATTGCTCGACAGCAAACTGGTTGCCCTGCGCAGCGCCCTGCAGGGTGCCGAAGATCCCACGTTGTTCGCCGAA CGTAGCGCAATCCTGCGTGATGAAATGAATCATCAGACTGATCTGGCTTTGCGGGTGCGTGGCCATGACGGCAGCCTGTGGTTCGACAGTGCCAGTAAGC TGAGCGCCGACTTGCCGACATCGCCGGGGTTGCACAGCCTGCAAAGCGCGGACATCGCCTATCGGGTGTACAGCGCGCCGCTGGATCCTGAGCGCAACGA CTCCCCACAACTGACCCTGCTGCTGGACATCACTCACCACCAGCACTTTCTGCAGCGTATGCAGCATTTGATCTGGCTGACGGTCGGTTTGTCGGCGCTA
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| Amino Acid Sequence |
>transcriptional regulator
MKLLIVEDQPKTGHYLRQGLSEAGFNVELVADGNTGQLLALTGDYALLILDVMLPGRDGWQILQAVRNAGLEIPVLFLTARDAVEDRVHGLELGADDYLV KPFAFSELLARVRSLLRRGSVTPQETSLHLADLRLDLIRRRVERNGQRIDLTAKEFALLELLLRRQGEVLPKSLIASQVWDMNFDSDTNVIEVAIRRLRL KIDDDFPDKLIHTVRGMGYVLEERQA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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