Pseudomonas sp. URHB0015, N526_RS0109040
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. URHB0015 N526DRAFT_scaffold00005.5_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CACCGCACCATTGGCCGCTGCCGGTAATGCCATCGGTACCGCGCTCAATCCGGTCACCAGTGGTGTCGCCAGCGTGACCCAGACCGTCGGCGGTGCAACC GGGCTTGGTGCTCCAGTCGCCGGTCTCACCGCTCAAGCCGGGGCCGCAGTGAGCAGCGTCGGCGCCAACATCGCCGCCGCTGCGCCCAACCCGGTAACCC AGGCCGTCGGCACTACCGTTGCGGCCGTCGGCAACACCCTGGGCGCCGTCGGCACTTTGACCAATGGCACCGGTAACGGTGGCTTGGCGGGCGGACTCGG TGCGCTCACCGGCAACAGACACTAACGCTGCACCTGACCGGTTCGCCGGCCGCCCTTTCAGCGCCTACGCTTGGTTGCAGGTGGAAAGCCGCAAAGGCTT TCCACCTTTTCTTCAAGGGGCCTGTTGCTCCCAATCGCTTGAGGGATCAATGGACTGAAGCTCCTCTGGCGAGGCTGCCGTTTCGACCAAGGAGTGTCCT
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| DNA Sequence for Gene |
>N526_RS0109040
ATGCGCGCTATTGCTTGCCTGTTGGTTTTCACCTGCTGCAGCTACACCCACGCTGATTCCCTGCCCAGTTACCTCAACACCAACCAGACCACCCGCAACC TGCCAGTCCCCAACCTGCCCACCGACGCCTACCGTCCAGCCGCCGCGCCCTTGCAGGTGCCGCAGCCCTCAGCCAGTGCAGACCAGCCGCTGACCATGGG CACTACCCTGACCATTCGCAAGTTGCAGATCGAGGGCGGCACCCGCTATCCCTTGAGTGAAGTGGGCAAGGTCTACCAACCACTGCTGGGCCACCCGATT ACCGTTGCCGAACTGATCGAGGCGACCCGCAGCGTCACCCGTCGTTATCAGGACGACGGCTACCTGCTGTCCTATGCCTATCTGCCGCAGCAATCGTTCG ACCAGGGCCTGGTGCGCGTGGTGCTGGTGGAGGGCTACATCAAGGATTACCAACTGCAGGGCGACATCGGCCGCTCCAGGGCGCTGCTCGACAAACTGGT GGCCAAGCTCAGCGCCGAACGTCCGCTGACCCGCAAGACCTTCGAGCGCTACACCACCCTGATGAACCGCATTCCCGGGGTCAGCCTGCAAGCCCAGGTG CCGCCGCCCGGCACCACCGATGGCGCCACCTACCTGGTGGCCGAGGCCAGCCGCAAGTCCTGGACCAGCAGCATGAGCACCACCGCCGACAACCGCAAAG GCACCCAGGCGCTGCTCGGTGTCAGCAGCAATTCACAGACCTCGATGGGTGAGCAGTTGAGCCTCCGCGGCCTGTTTCCACCGGGCGACGACGAGGAAAA ATACTACCGCCTGGACTACAGCCAATTCCTCAATGCCGAAGGTACGCAACTGCTGGTGTCCGGCTCCAGCTACCGCGCAGACCCGGCCACCCTGCTGCGC CTGGACAACGGCCTGCAGCTCAAGTCCCACCGTGAAAATGACCGCTATTCCGTAGGCTTCAACCACCCGCTGATCGCCGCGCCGACCGAGCAACTCAACG CCGGGGCGCGGCTGTATGCGGTGGACGACAAGACCCGCTATCGGGTGGTCGACGATCCACGGCAGATCAGCCTCAAGACCGACATCCGTGCGCTGGCGTT CGAAGGCGACTGGCGCAAGGCCGATGCGCGGCAACTGCAGATCATCAGCGCCGGCCTTTACCAGGGCATCAACGGCATGGGCGCGCACAGCGATGACCCG ACCTACGACCTGGATTTCTTCCGCATGCGTTTGTCAGGCGTACAAAGCAACAGCTACTTCGAGCACTGGCAAGGCGTGTTGTCGGCGGCGTTGTACTGGA GTGACGACACCTTGCCCGACAGCGAGCGTGCGGTGTTCGGCGGGCAGAACTTCGGGCGCGGTTACCCCGACGATCAGGCCTCCGGCGACAAAGGCTGGGG CGCGGCCTACGAGGTGAACTACAGCTTCAATCGCGACAGCAGCTGGCTGCGGATCCTGCAGCCCTACGTGGTACTGGACCGGGCGAAAACCTGGTTCAAC ACGTTGCCGATCCAGGGCAGCGACTTGTCCTCCGTGGCCCTGGGCCTGCGCTTTGGCGATGCCAAGTACTACAACGTTGCGCTGGAGGCCGGGAAGGCGA TGTCGGATGAAGCGCTGGATACCTTCAACCGGCGGCCTCGGTATAGCGTCAGTTTCAGTTATCAGTTGTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GGGGGGGTAGATGGCAAACGACCCGCTTGTGGCGGGTCGTTTGGGAGGGGGGGCGCTAAGCCGTTACTTCGTTCCCCCCCCCGTCACCGAGGTCAATCCA GAGGATACCGATGTAAGGATATCGTTAATTTTTGTACCTATCTCCGAGCCGAAATTAACGAGAACCAACGCAACCATCGCAACAATCAACGCATACTCAA TAGCCGACGCACCTTCGGTACGACGCATGAACAGTTGCACCCGAGTGAACAGATAACGCACGAAGGTAAGAAACATAGGGACTTCTCCTGCCTGGAAAGA AACGCTCAAAGGTTCTAAAGATTGGCCACATGTAAAGTCGGCTGAGGGAACAGGGTGTTCAGGGTCTCCAACAAACGAACGTGGTAAATGGGTTTGCGAA ACAGGCCTAACACCTGCATACGCCTTAATTCGTCGACATCCTCCGCGGCGGCATGCCCGGAGATAACAATGATTGGCAAATACTGACGCGAAGTGTGCTC
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| Amino Acid Sequence |
>potassium ABC transporter ATPase
MRAIACLLVFTCCSYTHADSLPSYLNTNQTTRNLPVPNLPTDAYRPAAAPLQVPQPSASADQPLTMGTTLTIRKLQIEGGTRYPLSEVGKVYQPLLGHPI TVAELIEATRSVTRRYQDDGYLLSYAYLPQQSFDQGLVRVVLVEGYIKDYQLQGDIGRSRALLDKLVAKLSAERPLTRKTFERYTTLMNRIPGVSLQAQV PPPGTTDGATYLVAEASRKSWTSSMSTTADNRKGTQALLGVSSNSQTSMGEQLSLRGLFPPGDDEEKYYRLDYSQFLNAEGTQLLVSGSSYRADPATLLR LDNGLQLKSHRENDRYSVGFNHPLIAAPTEQLNAGARLYAVDDKTRYRVVDDPRQISLKTDIRALAFEGDWRKADARQLQIISAGLYQGINGMGAHSDDP TYDLDFFRMRLSGVQSNSYFEHWQGVLSAALYWSDDTLPDSERAVFGGQNFGRGYPDDQASGDKGWGAAYEVNYSFNRDSSWLRILQPYVVLDRAKTWFN TLPIQGSDLSSVALGLRFGDAKYYNVALEAGKAMSDEALDTFNRRPRYSVSFSYQL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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