Pseudomonas sp. URHB0015, N526_RS0106980

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. URHB0015 N526DRAFT_scaffold00005.5_C, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TCATCTGTTCGGTGTTGGGCACCGTGCGGGCGCGATAACCCTTGCCGACGAGAAAACGCTCCAGCAGGCTGCTCAGCCCCGGATCGTCGTCAACAATAAG AATTTTTTCGCCTTCAGCAGTTTGTGCAGTGCTGCTCATTGGATGCTCCTTTGATCTCGGCGCGCATTATGGCGTAGCTGCCGTTATACGTACCGTGTGC ATTGTTAGCAGATTTTTCCTCTACCGCCACTCTGACAGGCATTGTGCCTACAGGTCGGGATGCCCCCCGAAGCGCGGAACGCTGGTTATAATGCGCGGCG TTTTGTGTCAGGCAACGTCAGATCGTTGCTGCCCCTGGCGACTTTTTATTTTTCATCGCCGGGCAGTAATTGTTCGATTTCACGGGTCAATGGGCTGCCT TTGATCCAGGTAGCGGCGCAGGCCAGGCCGCTCAACCAGACTCGCCGGGCCTTGATCCCTGTGCCCGCGAGCCTGCTTTCACAATTTGTCAGGTGGTTTT
DNA Sequence for Gene
>N526_RS0106980
ATGGACAGCATCAACAGCCGCATCGCCGAGGAACTCGGTGTCCGCCCACAACAGGTCGAAGCGGCCGTCGCGCTACTCGATGAAGGCTCCACGGTGCCCT TCATCGCCCGCTACCGGAAAGAAGTGACCGGCAGCCTCGACGATACGCAACTGCGTCATCTGGAAGAGCGCCTGCGCTACCTGCGAGAACTCGACGAACG GCGCATCAGCATCCTGGCCAGCATCCAGGAGCAGGGCAAACTGACCCCGCAACTGGAACGGGACATCAAGCTCGCCGACACCAAGACCCGTCTTGAAGAC TTGTACCTGCCATACAAGCAAAAGCGTCGCACCAAGGGCCAGATCGCCCTGGAAGCCGGCCTCGGCGAGCTGGCCGACAGTCTGTTCAACGACCCGAGCC TGACCCCGGATGTCGAAGCGGCGCGCTTCGTCGATGCCGAAAAAGGTGTCGCCGACGTCAAGGCTGCCCTTGAAGGCGCCAAGTACATCCTCATGGAGCG CTTCGCCGAAGACGCCAGCCTGCTCGACAAACTGCGCAGCTACCTGAAGCAGGAAGCCACCCTCAGCGCCCGCGTCATTGCCGGCAAGGAAGAGGAAGGC GCCAAGTTCCGCGATTACTTCGAACACGATGAACCGCTGAAAAGCATGCCGTCGCACCGCGCGCTGGCGATTTTCCGTGGGCGCAACGAAGGCATCCTCA GTTCGGCGCTGAAAGTCGGCGATGAACTGCCAGGCACCATGCACCCATGCGAAGGCATGATCGGCCAGCAGTTCGGCATCTCCAACCAGAATCGCCCGGC GGACAAATGGCTGTCGGAAGTGGTGCGCTGGACCTGGAAGGTCAAGCTCTACACCCACCTGGAAACCGATCTGCTGGGCGAACTGCGCGATGGCGCCGAA GCCGAGGCGATCAACGTCTTCGCCCACAACCTGCATGACCTGCTGCTGGCGGCTCCGGCCGGTCCACGCGCCACCCTGGGCCTCGACCCGGGCCTGCGTA CCGGCTGCAAGGTCGCGGTGGTCGACGCCACCGGCAAGCTGCTCGACCACGCCACGGTCTACCCGCACGTGCCGCACAACAAGTGGGACCAGACCATCGC CGTGCTCGCGGCCCTGTGCGCCAAGCACTCCGTCGACCTGATCGCCATCGGCAACGGCACCGCCAGCCGGGAAACCGACAAGCTGGCCGCCGACCTGATC AAGAAATACCCGGCGATGAAAATGACCAAAGTCATGGTCTCCGAGGCCGGTGCTTCGGTGTATTCGGCGTCCGAGTTGGCGTCCAAGGAATTCCCCGACC TCGACGTGTCGATCCGTGGCGCGGTGTCGATTGCCCGTCGCTTGCAGGATCCACTGGCCGAGCTGGTGAAAATCGATCCGAAATCCATTGGTGTTGGCCA GTACCAGCATGACGTGTCGCAGCTGAAACTGGCGCGCGGCCTGGATGCAGTCGTCGAAGACTGCGTGAACGCCGTCGGCGTCGACGTCAACACTGCGTCC GTGGCGCTGCTGGCACGCATCTCCGGGCTCAACGCGACCCTGGCGCAGAATATCGTCAGTCACCGTGACGAACATGGCGCGTTCAAAACCCGTGCAGCGC TGAAAAAAGTCGCACGCCTGGGTGAAAAAACCTTCGAACAGGCCGCCGGCTTCCTGCGCGTGATGAATGGCGACAATCCGCTGGACTCGTCCGCGGTTCA CCCGGAAGCCTACCCGCTGGTGCAGCGCATTGCCGCCGAGACCGACCGCGACATTCGCTCGCTGATCGGCGACAGCGGTTTCCTCAAGCGCCTGGACCCG AAAAAGTACACCGACGAAACCTTCGGGTTGCCGACGGTCACCGACATTCTGCAAGAGCTGGATAAACCCGGCCGCGATCCGCGCCCCGAGTTCAAGACCG CCGAGTTCCAGGAAGGCGTCGAAGACCTCAAGGACCTGCAACCGGGGATGATTCTGGAAGGTGTGGTAACCAACGTGACGGCCTTTGGTGCCTTCGTCGA TATCGGCGTGCATCAGGACGGTTTGGTACATATCTCCGCGCTATCCGAGAAGTTCATCAAGGACCCGCGTGAAGCGGTGAAGGCCGGCGACGTGGTCAAG GTCAAGGTCATGGAAGTCGACATCCCACGCAAACGCGTGGGTCTGTCGATGCGCATGAGCGACACCCCGGGCGAGAAGGTCGACGGTGCCCGTGGTGCCC GTCCTGGCTCGGCGCCCCGTCAATCGCAGGGCAACGCGCCACGCAAGGAAACCACGGCGGCAGCACCGAGCAACAACGCGATGGCTTCGCTGTTCGCCAA CGCCAAACAGTTGAAGAAGCGCTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
TGGAAGTCCCTGCCGGGTACACCGAAAGCGCCTTTTTCAAGTTGCTGGGTTGCCGCTTGCACAGCCTCGAAACCGGGGTTGCACAAGTGGCCCTGGAGTG GGTGCCGGAGCTGCGCAACCGTGCCGGGAAACTGCACGGCGGTGCCCTGTTCAGCCTGGTGGACATTGCCATGGGGCTGGCCTGTTCCAGTTCCCATGGT TTTGACCAGCAGAGCGCGACCATCGAGTGCAAGATCAACTACATCCGCGCCGTCGCCGACGGCGAGGTGCTGTGCACGGCCCGGGTAATTCACCCCGGCC GGCGCACGCTGGTGGTCGAGGCCGATGTGACCCAGGGCGACAAATTGGTCGCAAAAGCACAAGGCACGTTCGCTGTCCTGTAGCTAGCCGTCATCAATTT GGGTTAATTTCGGTGCTGTGACCGCAGCACCGGGATTTTCTGTGGGAGCGAGCCTGCTCGCTCCCACAATGGTTTTGATGAGTCGAAAAACAAGGCGAAA
Amino Acid Sequence
>transcription accessory protein
MDSINSRIAEELGVRPQQVEAAVALLDEGSTVPFIARYRKEVTGSLDDTQLRHLEERLRYLRELDERRISILASIQEQGKLTPQLERDIKLADTKTRLED LYLPYKQKRRTKGQIALEAGLGELADSLFNDPSLTPDVEAARFVDAEKGVADVKAALEGAKYILMERFAEDASLLDKLRSYLKQEATLSARVIAGKEEEG AKFRDYFEHDEPLKSMPSHRALAIFRGRNEGILSSALKVGDELPGTMHPCEGMIGQQFGISNQNRPADKWLSEVVRWTWKVKLYTHLETDLLGELRDGAE AEAINVFAHNLHDLLLAAPAGPRATLGLDPGLRTGCKVAVVDATGKLLDHATVYPHVPHNKWDQTIAVLAALCAKHSVDLIAIGNGTASRETDKLAADLI KKYPAMKMTKVMVSEAGASVYSASELASKEFPDLDVSIRGAVSIARRLQDPLAELVKIDPKSIGVGQYQHDVSQLKLARGLDAVVEDCVNAVGVDVNTAS VALLARISGLNATLAQNIVSHRDEHGAFKTRAALKKVARLGEKTFEQAAGFLRVMNGDNPLDSSAVHPEAYPLVQRIAAETDRDIRSLIGDSGFLKRLDP KKYTDETFGLPTVTDILQELDKPGRDPRPEFKTAEFQEGVEDLKDLQPGMILEGVVTNVTAFGAFVDIGVHQDGLVHISALSEKFIKDPREAVKAGDVVK VKVMEVDIPRKRVGLSMRMSDTPGEKVDGARGARPGSAPRQSQGNAPRKETTAAAPSNNAMASLFANAKQLKKR
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site