Pseudomonas aeruginosa PACS2, A0K_RS15675

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0050709 negative regulation of protein secretion
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: PseudoCAP:PA2492
 ECO:0000249
sequence similarity evidence used in automatic assertion		 21075931
Biological Process GO:0045861 negative regulation of proteolysis
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: PseudoCAP:PA2492
 ECO:0000249
sequence similarity evidence used in automatic assertion		 21075931
Biological Process GO:1900377 negative regulation of secondary metabolite biosynthetic process
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: PseudoCAP:PA2492
 ECO:0000249
sequence similarity evidence used in automatic assertion		 21075931
Biological Process GO:0006355 regulation of transcription, DNA-templated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00126
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003700 DNA-binding transcription factor activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00126
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Transcriptional regulators Other PACS2 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
SUPERFAMILY SSF46785 Winged helix DNA-binding domain IPR036390 Winged helix DNA-binding domain superfamily 7 89 6.19E-20
Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IPR000847 Transcription regulator HTH, LysR 11 70 9.6E-17
Gene3D G3DSA:3.40.190.10 - - - 174 269 2.1E-49
SUPERFAMILY SSF53850 Periplasmic binding protein-like II - - 93 294 4.52E-37
PANTHER PTHR30118 HTH-TYPE TRANSCRIPTIONAL REGULATOR LEUO-RELATED - - 1 302 1.8E-113
PRINTS PR00039 LysR bacterial regulatory protein HTH signature IPR000847 Transcription regulator HTH, LysR 37 47 9.8E-7
PRINTS PR00039 LysR bacterial regulatory protein HTH signature IPR000847 Transcription regulator HTH, LysR 47 58 9.8E-7
CDD cd08464 PBP2_DntR_like_2 - - 101 297 8.67471E-72
PRINTS PR00039 LysR bacterial regulatory protein HTH signature IPR000847 Transcription regulator HTH, LysR 26 37 9.8E-7
Pfam PF03466 LysR substrate binding domain IPR005119 LysR, substrate-binding 101 292 3.6E-20
Gene3D G3DSA:1.10.10.10 - IPR036388 Winged helix-like DNA-binding domain superfamily 2 90 9.0E-22
Gene3D G3DSA:3.40.190.10 - - - 94 293 2.1E-49

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.