Pseudomonas sp. URHB0015, N526_RS0104170
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas sp. URHB0015 N526DRAFT_scaffold00003.3_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CTGTTGTCGCAACTCTCGCCCTTCAGTTGCCGCGTGGTAGTCATGCATGGCTATCTGGACGATGAACAGTTTTCCCGGCTGTACGGCGCCGCCAGTTTCT ATGTCAACGCTTCGCGCTGCGAAGGTCTGTGCCTGCCGTTGATGGAGTTCATGGCGTGTGCCAAACCGGTGATCGCCCCTCGGCACACGGCGATGCTGGA TTACATCGACGACAGCGTCGCGTTCATCGTCGACTCCAGTCAGCAACCTGCGATATGGCCGCAGGACTCGCGGATTCTGTATCGCACGGTTTCCCATCGC CCGGATTGGGGGTCGTTGAAAAATGCTTATCTGGCCAGCTACCAAATGGCAAAAGAGCAGCCCGAGCGCTACCAGGTGATGGCGCTGGCGGCTAACGAAC GCATGCGTGAGTACTGCAATTTCGCTGGGGTACAGCAGCGCCTTGGCGATTTTCTCGACGATGTGCCGCAGGTGCAGGTCGCTGTGACGGGGGCCGCATC
|
|
| DNA Sequence for Gene |
>N526_RS0104170
ATGCTGATCATCATTCATTCGGAAACCAACAAAAGTAACATCGAGCAGAACCTCGGTCGGCCCGAGTACAGCTATTACTTTGTGCTCAAAGAGTTCCGCC CGGTGCTGGAGCGCATCGGCCAGGTGATCGAGGTGAGCGACCCGGACGAACTGGTCGATCGCCTGTATTTCGATTGCCGCAGCCGCGGCGAAGACTGTGT GTTCCTGTCGTTCTCGCCGCCTCATCGCACGCCGATCCACTACGCCTGTCCTACCATTCCGGTTTTCGCCTGGGAGTTCAGCACCATTCCCACCGATACC TGGCACGGCGAACCCCGCCACGACTGGCGCGTGGTGCTGGAGGCCGCCGGTGCCGCTATCACCCATTCCAGCTTCACCGTACAGGCCGTGCGTGATGCCA TGGGCCCGGCCTATCCCGTCAGTGCCATTCCGGCGCCGGTCTGGGATCGCTTTGCCCATCGCGGCCAGGCTCTGGGGCAATCTGCGCTGGCGCAACGGGT GACGCTCAACCTGCGTGGCCTGTTGCTCGACAGTCGTACCCTCGACTTGCGCCCCTATGGTCCGCCTGCGTTGCGCGAGGGCGAGCCGGTGTCTTTCGAC AGGCCGGTGGGGGATTGCCAGGTCGAACTGGACGGAGTGATCTACACCTCGGTGTTCAATCCCTACGATGGCCGCAAGAATTGGCAGGACATGCTCAGTG CGTTCTGCACGACCTTCCGCGATACGGCAGATGCCACGCTGGTGTTGAAACTGACCCACCATGACATCTCTGATGCGTTGAACGACATGCTCCACCACCT GTACAAGAATCAGTCGTTCCGCTGCCGTGTGGTACTGATCCACGGCTTCCTGGCCGACACGGATTATGAGCGCCTGGTGGAGGCCACCAGTTTTGTGGTC AACAGTTCGTTCGGCGAGGGCCAGTGCCTGCCGCTGATGGAGTTCATGTCCTGCGGCAAGCCGGCTGTTGCACCGTTCAACACGGCGATGGCGGACTATA TCGACGCCGATAACGCCTTCATCGTCGACTCCACTGACGAACTCACCGCCTGGCCCCACGACCCGCGCGCGGCTTACCGCACGCTGCGTTATGTGACCAA TTGGGACTCGTTGTGCTCGGCGTATCAAGCCAGCTACGCCGTAGCCAAACACGATCAGGTGCGTTATGCGCGCATGGCCGCCCATGCCGTCAACCGGCTG CAAGGGTTCTGCAGCCAGGCGGTCGCCGAGCAGCGACTGCGCATGTTCCTTGCGGACGTGGCGGCACAGGCGAAACCGGCGTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
TCGGGCGTCTGCTCGATTGGCTGCGCCCTGCGCCTGCACCGGTGGTGGAACCTGAAACTGCGGTGTCGCCGCGTGATTGCGGCTTCACCGATGCGGTGCT CGATGGCTGGTTTCTCGGTGCCAGCGGCGAGTTGCTCAAGGGCTTTGCCATCAGCGCCGACGATACGCTGCTGGATGTCGGCTGCGGCGAAGGGGCGGCG ACCTTGTTTGCCGTGCGCCAGGGCGCGTCGGTGATTTTTACCGACAGCGAACAGGATAAGGTCCGCGACCTCGCTCGATTGGTCGAGGCACAGAGTCAGG CTCCGTCCTTGGGCCTGGTCAGCAATAGCCTGCCGTTACCCCTGGCGGATGGCTGCGCGAGTAAAGTGGTGTGCATGGAGGTGCTGGAGCACGTCGACGA ACCCGAGCGGTTCATGGCCGAGCTGGTGCGCATGGGGCGCCCGGGCGCCCAGTATTTGCTCAGCGTGCCGGCACCGGTGGGTGAACACCTGCAGCAGGGG
|
|
| Amino Acid Sequence |
>glycosyltransferase
MLIIIHSETNKSNIEQNLGRPEYSYYFVLKEFRPVLERIGQVIEVSDPDELVDRLYFDCRSRGEDCVFLSFSPPHRTPIHYACPTIPVFAWEFSTIPTDT WHGEPRHDWRVVLEAAGAAITHSSFTVQAVRDAMGPAYPVSAIPAPVWDRFAHRGQALGQSALAQRVTLNLRGLLLDSRTLDLRPYGPPALREGEPVSFD RPVGDCQVELDGVIYTSVFNPYDGRKNWQDMLSAFCTTFRDTADATLVLKLTHHDISDALNDMLHHLYKNQSFRCRVVLIHGFLADTDYERLVEATSFVV NSSFGEGQCLPLMEFMSCGKPAVAPFNTAMADYIDADNAFIVDSTDELTAWPHDPRAAYRTLRYVTNWDSLCSAYQASYAVAKHDQVRYARMAAHAVNRL QGFCSQAVAEQRLRMFLADVAAQAKPA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|