Pseudomonas sp. URHB0015, N526_RS0103775

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. URHB0015 N526DRAFT_scaffold00003.3_C, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CTCAAGGTCCACACCCCAATTACTGCCCAAGACACTGGCGGCAGCTTGCACGACCGCCTCGCCGAAATGGGCCCGCCAGCTGTGCTCCAGGCAATTGCCG GGCTGGCTGCCGGCACCCTGCAAGGTGAAGTGCAGGACGATAGCCTGGCCACCTACGCCCACAAATTGAACAAGGACGAAGCGCGCATTGACTGGAGCCG TCCGGCCGTCGAGCTGGAGCGACTGGTCCGGGCTTTCAATCCATGGCCGATCTGCCACAGCACACTCAACGGCGAAGCGTTGAAAGTGCTCGCCGCCACC TTGGCCGACGGCAAAGGCACCCCCGGCGAAATCATCGGCGCCAGCAAGGACGGCCTGCTGGTTGCCTGCGGCGAACAGGCGCTGTGCCTGACTCGCCTGC AACTGCCCGGCGGCAAGGCCCTGAACTTCAGCGACCTGTTCAACAGCCGGCGCGAAAAATTCGCTGTCGGCACCGTCCTTGGCCAAGCGGTGGACGCGCA
DNA Sequence for Gene
>N526_RS0103775
ATGAACCCGCGTCTGGCCGCCGCCAAGGCACTGACTGCCGTGCTCAACGGCAAAGCTTCGCTCAACAGTTCGCTGCCGACCCAGCTGGACAAGGTCGAAG ACCGCGATCGCGGCTTCACCCAGGACCTCGCTTTCGGCACCGCGCGCTGGCAGCCACGCTTGTCGGCGCTGGCGGCCAAGCTGCTGCAAAAGCCCTTCAA GGCCGCTGATACCGATGTCGAGGCGCTACTGCTAGTCGGCTTGTATCAGTTGCTCTACACCCGTGTTCCGGCCCATGCCGCCATCGGCGAAACGGTTGGC TGCGCCGACAAGCTGAAAAAACCGTGGGCAAAAGCCCTGATCAACGCCGTCCTGCGCCGCGCCCAACGTGAGAGTGAAGCGCTGTTGGCAGAACTGGAGC ACGATCCGGTAGTGCGCACCGCCCATCCGCGTTGGCTGCAGAAGTCGCTCAAGGCCTTCTGGCCCCAGCAATGGGAAGCCATCTGCGCGGCCAACAATGC GCACCCGCCGATGATTTTGCGGGTCAATCGTCGCCATCATTCCTGCGACGCTTACCTCGCCCTGTTGAACCAGGCCGGTGTTGCCGCACAACCCTGCGTA TTCAGCCAGGACGGCATCGTCCTCGACACGCCAGGCGACGTGCGCAGCCTGCCGGGCTTCAGCGAAGGCTGGATCAGTGTGCAAGACGAAGCCGCGCAAC TGGCGGCCGATCTGCTCGATCTGGCACCCGGTCAACGCGTGCTGGATGCCTGCTGCGCCCCGGGCGGCAAGACCTGCCATATTCTTGAAGTTGAACCGGC GCTGGCCGGCGTGGTGGCAGTGGACCTCGAAGCCAAACGCCTGCTGCGGGTACGGGAAAACCTCGATCGCCTACGCCTGGATGCCGAGCTGATCGCCGCC GACGGCCGCGACATTCAGGCCTGGTGGGACGGCAAACCGTTCCAGCGGATCCTGCTCGATGCGCCGTGCTCGGCCACCGGGGTGATTCGCCGTCACCCGG ACATCAAGCTGACTCGCCAACCCGACGACATCGCCGCGCTGGCCACTCTGCAGGGCGAGTTGCTCGACGCCATGTGGAAGACTCTCGAGGTGGGCGGCAT CCTGCTGTACGCTACCTGCTCGACGCTGCCCACCGAAAACACCGAAGTGATCGAGGCGTTTCTCGCCCGCACCCCGGGTGCCCGCGAGCTGGATATCGCC AGCCAGGCCGGGATCAAGCAACCCCATGGTCGCCAGTTGCTGGCACAAGAGGGTGGTCATGACGGGTTCTATTACGCCAAGCTGATCAAGATCGCCGCCG CGCGCGGTTAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
ACGATTCCAAGGGAGTGACTGGATGAAAATCATCATCCTCGGCGCAGGGCAGGTGGGCGGATCGCTGGCGGAGCACCTGGCCAGCGAAGCCAATGACATT ACTGTGGTCGACACCGACGGCGAACGCCTGCGCGACCTCGGCGATCGCCTCGACATTCGCACCGTGCAAGGTCGCGGCTCGCTGCCTACCGTGTTGCGCT CGGCCGGTGCCGACGACGCCGACATGCTGGTGGCGGTGACCAACAGCGACGAAACCAACATGGTCGCCTGCCAGGTGGCCCACACCCTGTTCCACACCCC GACCAAGATCGCCCGGGTCCGCGAAGCGTCCTACCTGACCCGCGCTGACCTGTTCGACAACGACGCGATTCCAGTGGACGTGCTGATCAGCCCGGAACAG GTCGTGACCAACTATATCAAGCGTCTGATCCAACACCCCGGCGCCCTGCAGGTCATCGACTTCGCCGAAGGCAAGGCGCAGTTGGTGGCGGTCAAGGCCT
Amino Acid Sequence
>16S rRNA methyltransferase
MNPRLAAAKALTAVLNGKASLNSSLPTQLDKVEDRDRGFTQDLAFGTARWQPRLSALAAKLLQKPFKAADTDVEALLLVGLYQLLYTRVPAHAAIGETVG CADKLKKPWAKALINAVLRRAQRESEALLAELEHDPVVRTAHPRWLQKSLKAFWPQQWEAICAANNAHPPMILRVNRRHHSCDAYLALLNQAGVAAQPCV FSQDGIVLDTPGDVRSLPGFSEGWISVQDEAAQLAADLLDLAPGQRVLDACCAPGGKTCHILEVEPALAGVVAVDLEAKRLLRVRENLDRLRLDAELIAA DGRDIQAWWDGKPFQRILLDAPCSATGVIRRHPDIKLTRQPDDIAALATLQGELLDAMWKTLEVGGILLYATCSTLPTENTEVIEAFLARTPGARELDIA SQAGIKQPHGRQLLAQEGGHDGFYYAKLIKIAAARG
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site