Pseudomonas sp. URHB0015, N526_RS0103755

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. URHB0015 N526DRAFT_scaffold00003.3_C, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GCGCAACCGGATCATCAGTGGTTTGTCCCTCGGGGTGCTGGTGGTTGAGGCCAGTGTCGCCAGTGGTTCTTTGATTACTGCACGGCTTGCTGCTGAACAG GGGCGCGAGGTCTACGCCATCCCGGGCTCCATCCATCACCCGGTCGCCCGAGGCTGTCACCAGCTAATTCGTGATGGCGCGGTGCTGGTGGAAACCATCG AGCACATTCTCGAAGGGCTACGGGGCTGGCAAAACCTGGCGGTGCCCGCGCAACCGGCCGTGGCGCTCGATCATCCCCTGCTCTGTTTGCTGATTGCTGC ACCGCATACCAGCGAAGCCTTGGCTGACGCCTGCGGCTGGACATTGCCGAAAGTGCTGGCGGCCCTGACCGAGCTTGAGATGGATGGGCGCGCCGTGTGC GAAGGCGGACGCTGGTTTGCCCGCCTAAGCTAGGTTCAGACGCTGGGTTTTACAGGGAAGATGGGTAAACTGCGCACAGCCTTAATTTGGAGAGTCGATC
DNA Sequence for Gene
>N526_RS0103755
ATGGTCAACAGGTGGCGTGTGCAGCAAGCCGCACGAGGAATTCGCGCAGGGGCGGTGATTGCCTATCCAACGGAAGCTGTCTGGGGGCTGGGTTGCGATC CCTGGGACGAAGAAGCGGTCTATCGCCTGCTGGCGATCAAGGGGCGCTCGGTTGAAAAGGGCTTGATCCTGGTGGCCGATAATATCCGTCAGTTCGATTT CCTGTTCGAGGATTTCCCTGAACTGTGGATGGATCGCATGGCCAGCACCTGGCCAGGCCCCAACACCTGGTTGGTCCCGCATCAGAACATGCTGCCGCAA TGGATCACGGGTGTGCACGAAACTGTCGCCTTGCGCGTCAGCGATCACCCGCAGGTGCGCGACCTGTGTTCGCTGGTCGGGCCGCTGGTATCGACTTCCG CCAACCCGCAGGGCCGTCCGGCGGCGCGCACGCGTCTGCGGGTCGAGCAGTACTTCCGTGGTGAAGTCGACCTGGTGCTGGGCGGCAGCCTCGGTGGGCG CAAGAATCCGAGCGTGATTCGCGACCTGGCCACCGGGCACGTCGTGCGCCCGGATTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CACCGCTTGCCGCTCTTCGCTGGCAGGTGAGCGCCAGCGAAAGCGGCTTATTTCAGGGCAGGAGAATGGTCGAGCCGGTAGTGCGCCGCGCCGACAACTC TGCCTGCGCCTTGGCCGCGTCGGCCAGCGAATAGCGCTGGCTGATACCCACCTTCAGTTGGCCACTGATGATCATCTCGAACAGCTCATCGGCCATGCAC TGCAGGTTGTCGGCGTTGTTGGCGTAGGTCGCCAGAGTCGGGCGAGTGACGTACAGCGAGCCTTTGGCCGCCAGAATCCCCAGGTTAACGCCGTCAACGG CACCGGAGGCATTGCCGAAGCTCACCAGCAGGCCACGGGGCGCAGTGCTGTCGAGGGAGGTCAGCCAGGTGTCTTTGCCGACACCGTCGTAAACTACCGG GCATTTCTGCCCATCGGTCAGTTCCAGCACTCGTTGTGCAACGTTTTCGTGGCTGTAGTCGATGGTCGCCCAAGCGCCGTTGGCCTTGGCCAGCGCGGCC
Amino Acid Sequence
>tRNA threonylcarbamoyladenosine biosynthesis protein RimN
MVNRWRVQQAARGIRAGAVIAYPTEAVWGLGCDPWDEEAVYRLLAIKGRSVEKGLILVADNIRQFDFLFEDFPELWMDRMASTWPGPNTWLVPHQNMLPQ WITGVHETVALRVSDHPQVRDLCSLVGPLVSTSANPQGRPAARTRLRVEQYFRGEVDLVLGGSLGGRKNPSVIRDLATGHVVRPD
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site