Pseudomonas sp. URHB0015, N526_RS0102965

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas sp. URHB0015 N526DRAFT_scaffold00002.2_C, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
CGCCGGGCAGCGTTTCCTGGAAATCTGGTCGGGCTTGCCGGTGCTGTATCTGCTGATCATTCTCGCCAGTTTCGTGCAGCCCAACTTCTGGTGGCTGCTG GGAATCATGCTGCTGTTTTCCTGGATGAGTCTGGTGGATGTGGTCCGTGCCGAGTTCCTGCGTGGGCGCAATCTCGAATACGTGCGTGCCGCCCGGGCGC TGGGCATGCAGAACGGCGCGATCATGTTCCGCCATATCCTGCCCAACGCCATGGTCTCGACCATGACCTTCATGCCGTTCATCCTCACCGGCGCCATCGG CACCCTGACCGCCCTGGACTTCCTCGGCTTCGGTTTGCCGGCCGGCAGTGCGTCCCTGGGTGAGCTGGTATCCCAGGGCAAGTCCAACCTGCAGGCGCCG TGGTTGGGTATCAGTGCCTTTGCGGTACTGGCGGTGATGTTGAGTTTGCTGGTGTTTATCGGCGAGTCCGCTCGCGATGCCTTCGACCCGAGGAAGTGAA
DNA Sequence for Gene
>N526_RS0102965
ATGAATCAGGACAATCTGATCGAAGTGCGCGACCTCAGCGTCGAGTTTGGCATCGGCGACCGACGGCATCGGGTGGTCGAGGGTGTCAGTTTCGACATCA AGCGCGGGGAAACGCTGGCGCTGGTCGGCGAAAGCGGTTCGGGCAAGTCGGTCACCGCGCACTCGATCCTGCGCCTGCTGCCCTACCCCCTGGCCCGTCA CCCCAGCGGCAGCATCCACTACTCCGGGCATGACCTGCTGAGCCTGAAAGAAAAAACCATCCGCCACATTCGTGGCAATCGCATCGCGATGATTTTTCAG GAACCCATGACCTCGCTGAACCCGCTGCATTCGATCGAGAAGCAGATCAACGAGGTGCTGGGGATCCACAAGGGTCTCACCGGCAAGGTCGCGACCAAGC GCACCCTGGAATTGCTGGAACTGGTGGGCATCCCTGAACCGCACAAACGCCTCAAGGCTCTCCCCCACGAATTGTCCGGCGGCCAACGACAGCGGGTGAT GATTGCCATGGCCCTGGCCAACGAGCCGGAACTGCTGATCGCTGACGAACCGACCACCGCGCTGGACGTCACCGTGCAGCTGAAAATCCTCGATTTGCTC AAGGATTTACAGGCGCGCCTGGGCATGGCGCTGCTACTGATCAGCCACGATTTGAACCTGGTGCAAAGAATTGCGCATCGGGTATGTGTCATGCAGCGCG GTTGCATCGTCGAACAGGCATCGTGTGAGGAATTGTTTCGCGCGCCACAGCATCCGTACACCCGTGAATTGCTGGCAGCGGAGCCCAGCGGACGCCCGGC GAGCAATGAAATCGGCCCGCCGCTGCTGCAAGTCGAGGACCTGAAAGTCTGGTTCCCGATCAAGAAAGGCTTTATGCGCAGCACCGTCGATTACGTGAAG GCGGTGGACGGAATCAACTTCAGCCTGCCCCAGGGCCAGACCCTCGGCATTGTCGGCGAGAGTGGTTCGGGCAAGTCGACGTTGGGCCTGGCGATACTGC GTTTGATTGCCAGCAAGGGCGCGATCCGTTTTGAAGGCAAATCGCTGGACAGCCTGACGCAGCAACAGGTCAGGCCGCTGCGGCGGGAGATGCAGGTGGT GTTCCAGGACCCCTTCGGTAGCCTGAGCCCACGCATGTGCGTGAGTCAGATCGTCGGCGAAGGCCTGCGAATTCACAAGATCGGCACGGAAGCAGAGCAA GAGCAGGCTATTATTGCCGCGCTCGAGGAAGTAGGCCTGGATCCGGACACCCGGCACCGCTACCCTCACGAATTTTCCGGTGGGCAACGGCAAAGAATCG CCATTGCCCGGGCATTAGTGCTAAAACCGGCGTTGATTTTGCTGGACGAGCCGACTTCGGCCCTCGACCGCACCGTGCAACGCCAAGTGGTTGAACTGCT GCGCAGACTGCAGAGCAAGTACAACCTGACGTATCTGTTCATCAGCCATGACCTGGCTGTGGTGAAAGCGCTGAGCCACCAATTGATGGTGGTCAAGCAT GGCCAAGTGGTCGAACAAGGTGCTGCGCAAGCGATCTTTGCCGCACCGCAACATCCCTATACCCAGCAGTTGCTGGAGGCCGCCTTCCTGGCCCCAGCAT CAGCCGAATAA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CCTGAAAGAGGAGCAACACATGGGTTTTCTCGCCGGTAAGCGCGTACTGATCGTCGGTGTCGCCAGCAAGCTGTCCATCGCATCCGGCATCGCTGCCGCC ATGCATCGCGAGGGCGCTGAGCTTGCCTTCACTTATCAGAACGACAAACTCAAGGGTCGTGTCGAAGAGTTCGCACAAGGCTGGGGTTCGAGCCCTGAGC TGTGCTTCCCGTGCGACGTGGCCAGCGATGAAGAAATCGCCAAGGTCTTCGAAGCCCTGAGCCAGAAGTGGGACGGCCTGGACTGCATCGTGCACTCCGT GGGCTTCGCCCCGGGCGACCAACTGGACGGCGACTTCACCGAAGCCACCACCCGTGACGGTTTCCGCATTGCCCACGACATCAGCGCCTACAGCTTCGTG GCCCTGGCCAAGGCCGGTCGCGAAATGATGAAAGGCCGCAACGGCAGCCTGCTGACCCTGTCGTACCTGGGCGCCGAGCGCACCATGCCGAACTACAACG
Amino Acid Sequence
>microcin ABC transporter ATP-binding protein
MNQDNLIEVRDLSVEFGIGDRRHRVVEGVSFDIKRGETLALVGESGSGKSVTAHSILRLLPYPLARHPSGSIHYSGHDLLSLKEKTIRHIRGNRIAMIFQ EPMTSLNPLHSIEKQINEVLGIHKGLTGKVATKRTLELLELVGIPEPHKRLKALPHELSGGQRQRVMIAMALANEPELLIADEPTTALDVTVQLKILDLL KDLQARLGMALLLISHDLNLVQRIAHRVCVMQRGCIVEQASCEELFRAPQHPYTRELLAAEPSGRPASNEIGPPLLQVEDLKVWFPIKKGFMRSTVDYVK AVDGINFSLPQGQTLGIVGESGSGKSTLGLAILRLIASKGAIRFEGKSLDSLTQQQVRPLRREMQVVFQDPFGSLSPRMCVSQIVGEGLRIHKIGTEAEQ EQAIIAALEEVGLDPDTRHRYPHEFSGGQRQRIAIARALVLKPALILLDEPTSALDRTVQRQVVELLRRLQSKYNLTYLFISHDLAVVKALSHQLMVVKH GQVVEQGAAQAIFAAPQHPYTQQLLEAAFLAPASAE
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site