Pseudomonas umsongensis UNC430CL58Col, N519_RS0128250
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas umsongensis UNC430CL58Col N519DRAFT_scaffold00002.2, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GAATGCTCTGGCGTGCAGATCAACAGCATCCGACAGCTGCTGCCAGGTGTAACGCAGCTGTTGATGGCGCACGACCAGCGCCTCCCCGTTCGGGTATTGC GCGACGGTGTTATCAAACGCCTGGCCGATGGTCATCGCCAGCAAGGCTTTGTCCTGGGAACCACGGGTATAGCTGCGCTGCGGGTTTGCACTGGGTTGAT CCATGACGACCCCTATTGTCTTTATTAATGGGCTGTACCGGCGACCTGTAGGAGCCGGCTTGTGTGGCGAGGGGGCTTGCCCCGTTGGGCCGCGCAGCGG ACCCAAGATCTGCGAGCGCTGCGCACTCGAACGGGGGCAAGCCCCCTCGCCACAGTCTTTCAGAACTGGCTCTACTCTCGCTCAAGTTGACGTTAACGTA AAGGGTGATTGACAGCCATTCGTCACAGGCTTACGTTAACGTAAAGGTGAGAGCTGAATCACTGCCCTCCCCACCCTACAAAAAAGCCAAAAGGTGCCCC
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| DNA Sequence for Gene |
>N519_RS0128250
ATGAGCTACCCATCCCTGAACTTTGCCCTCGGTGAAACCATCGACATGCTGCGCGATCAGGTTCAGTCCTTCGTCGCCAAAGAGATCGCCCCGCGCGCCG CTCAGATCGACATCGACAACCTGTTCCCGGCCGACCTGTGGCGCAAATTCGGCGACATGGGCCTGCTGGGCATCACCGTGCCGGAAGAGTACGGCGGCGC CGGCCTGGGTTATCTGGCGCACGTGGTTGCCATGGAAGAAATCAGCCGTGGTTCGGCGTCGGTCGCCCTGTCCTACGGCGCGCACTCCAACCTCTGCGTC AACCAGATCAACCGCAACGGCACTCATGAACAGAAAAGCAAATACCTGCCGAAACTGATCAGCGGCGAACACATCGGTGCCCTGGCCATGAGCGAGCCGA ACGCCGGTTCCGACGTGGTCTCGATGAAGCTGCGCGCCGACAAACGCGGCGATCACTACGTGCTCAACGGCAGCAAGACCTGGATCACCAACGGTCCTGA CGCCAACACCTACGTGATCTACGCCAAGACCGACCTGGAAAAAGGCCCGCACGGCATCACCGCGTTCATCGTCGAGCGTGACTGGAAAGGTTTCAGCCGC AGCAACAAATTCGACAAGCTGGGCATGCGCGGTTCAAACACCTGCGAGCTGTTTTTCGATGACGTCGAAGTGCCGGAAGAAAACATCCTCGGCGTACTCA ATGGCGGCGTGAAAGTGCTGATGAGCGGCCTCGACTATGAGCGCGTAGTGCTTTCCGGTGGCCCGACCGGGATCATGCAGGCCTGCATGGACCTGATCGT GCCGTACATCCACGACCGCAAACAGTTCGGCCAGAGCATCGGCGAATTCCAGTTGATCCAGGGCAAAGTCGCCGACATGTACACCCAACTCAATGCCAGC CGCGCTTACCTGTATGCCGTGGCCCAGGCCTGCGAGCGCGGCGAAACCACCCGCAAGGACGCCGCCGGGGTGATTCTCTACAGCGCCGAACGCGCCACGC AAATGGCCCTCGACGCGATCCAGATTCTTGGTGGCAATGGCTACATCAACGAATTCCCGGCCGGTCGTCTGCTGCGTGACGCCAAGCTGTATGAAATCGG CGCCGGCACCAGTGAGATCCGTCGCATGCTGATCGGTCGCGAACTGTTCAACGAAACCCGCTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
ACGGAGCTGTCCATGGCTATCCTGCATACCCAGCTCAACCCCCGTTCGGCGGAGTTCGCGGCCAACAGCGCGGCGATGCTCAAACAGGTCGACGCCCTGC ACACCCTGCTCGCGCAAGTGCAGCAAGGTGGCGGCCCGAAGGCGCAAGAACGTCACACCTCGCGGGGAAAACTGCTGCCCCGTGAGCGGATCAATCGCCT GCTCGATCCGGGTTCGCCGTTTCTTGAGATCAGCCAGCTGGCGGCCTACGCGGTCTATGGCGAAGACGTTCCCGCCGCGGGCGTGATTGCCGGGATCGGC CGGGTGGAAGGCGTCGAATGCATGATCGTCGCCAACGATGCCACCGTGAAAGGCGGCTCGTACTACCCGCTGACGGTGAAAAAACACCTGCGTGCGCAAA CCATCGCCCAGCAGAATCGCCTGCCGTGCATTTATCTGGTGGACTCCGGTGGCGCCAACCTGCCGCGTCAGGATGAAGTGTTCCCGGACCGCGAACACTT
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| Amino Acid Sequence |
>isovaleryl-CoA dehydrogenase
MSYPSLNFALGETIDMLRDQVQSFVAKEIAPRAAQIDIDNLFPADLWRKFGDMGLLGITVPEEYGGAGLGYLAHVVAMEEISRGSASVALSYGAHSNLCV NQINRNGTHEQKSKYLPKLISGEHIGALAMSEPNAGSDVVSMKLRADKRGDHYVLNGSKTWITNGPDANTYVIYAKTDLEKGPHGITAFIVERDWKGFSR SNKFDKLGMRGSNTCELFFDDVEVPEENILGVLNGGVKVLMSGLDYERVVLSGGPTGIMQACMDLIVPYIHDRKQFGQSIGEFQLIQGKVADMYTQLNAS RAYLYAVAQACERGETTRKDAAGVILYSAERATQMALDAIQILGGNGYINEFPAGRLLRDAKLYEIGAGTSEIRRMLIGRELFNETR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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