Pseudomonas umsongensis UNC430CL58Col, N519_RS0127600
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas umsongensis UNC430CL58Col N519DRAFT_scaffold00002.2, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GTCGAAGGAGAGCATGCGCTCGTGCAACTCGTCGGCCTGTTGCATGACCTTGATCGGGTAACCGGGGTTGTCCTTGAACCCGTAATACCAGACTGCGAAG CCAGCGCCGGCGCTGATCGCCAGGGCCAGCGGCAGGCCGATGTAAAGAGCCTTTTTCGAACGTGGTTTTGTCATTGCCATCTCTGTCAGGTTCGCCGCCC CGGTGCAGGCGCAGGGGCCTTTGCTATCTGGGAGGAACGAGTGGCTGGCAGAAAAAATTAGGAGACAGCGAGATACCCTGTGGCGAGGGAGCTTGCCCCC GTCCGGCTGCGAAGCAGTCGTAAATCCGGTGCATGCGGTTTGCCTGGCGGAACGAGGTTGCAGGTTTCAGGACTGCTTCGCAGTCCAACGGGGGCAAGCC CCCTCACCACAGGGATTGTGTTTGGCACGCTTAAATTTCCCCCCACAACAAACGTTCTAGCTTGGATAAAGCCTGCTTCATGGCTGACACAGGTAGGGCA
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| DNA Sequence for Gene |
>N519_RS0127600
ATGACGATTTCTCGACGATGGTTCATGGCAGGCCTGGCGCTGACTGGCGCTGCCGTGCCTGCGGCTTATTATGGGCATCGCGAATGGACGAAGCCGGACC CGACGATCACCCCCGGCGAAGCGACGGTCGAACTCGCGGACACCGCGGGTCAGCAGTTGGCCAACTCGCTGCGAGGCATCTGGGATATCCGCTTCGAAGG TTCGCAAGCGGGCCTCGACGGTTTACCGCAGCACGGGCTGGAGCTGTTTCTCGACATCGCCCAGCGCGGCCGCGGCCTGCGTGGCTGCCTCGATACCGCG CAGCAGTTACGCGGCGAAGCCGAGCCGCGTTACCGGGTGATCGGCGACCTGGTGTCGCCTGACGCCAGCCAACTGTACTGGCGCCTGATCGATCGGCAAT CGGCCAACGGCGCACCGACTTATGAGCTGGCGGTCACGCTCGATGAGGTCTGGGCCGATTTCGGCAATGCCGGCAGTGGCACGCTCAGCGGGCGGATTCT GCGTCTGGATCGCCCGCTTGGTTTGCCGGAACTGGACAATCGCTTTGTCGCGCGCAAACGGCTGTTTCCCGAAGCCCGTGAGCGTGTCGGTCTGAATCCG CCGTTGCTGGCGTGGCTGATATCCGCCGAACACCGCTTGTTCCACCAGCTCTGGCACGCCTCGCGGGACAAATGGCACAAACTCTCCAAGGACCAACAGG GTGCCTTGCGCGGCATCGGCTGGCAGCCGGGCCCGCGAGGCAATGAGCGCGATGCCCGGGGGCCGCGCAAAGACCGTAATGGCTCGGGGATCGACTTTTT CTTCATGCACCGGCACATGCTCGGCACGGCGCGTTCGATGCAGGACCTGCCGTCCTGGTCGAGCTTCCCGATGCCGCAGCCGGAGCTTGAACGCGACCGT CAGGGCTTCGCCCGCTATTTCGACAATCACGATGGCACGGCGCTGCCGCCCACCTGGCTGGCCGCCGAAGACACCGAGTACACCCAGTGGGTCAGCGACA TCAAGACCGCCGAAACCTTCCACAGCAATTTTCAGGTGTGGGAATCCCGCTACCGCGACCCGCGTTATCTGTCGAAGCTGACCCTGGGGCAGTTCGGTTC GGAGGTCGAGCTGGGGCTGCACGACTGGCTGCACATGCGCTGGGCCTCGGTGCCACGCGATCCTTCCAACGGTCAGCCGGTGCCTTTCGCCAGGGATCCG GCGGACTTTGCCGCACGCTGGTATGCGCCGGAAAACGACTTCCTCGGTGACCCGTTTTCATCCCACGTGAACCCGGTGTTCTGGCATTTCCATGGCTGGA TCGATGATCGGCTGGAAGACTGGTTCCGCGCCCACGAGCGTTTCCATCCGGGGGAACTCAGTCGGCTTGAGGTCAATGGCGTGCCCTGGTTCGCTCCGGG GCGCTGGGTTGAAGTCGATGATCCGTGGCTCGGCCCGAGCACCCACGGTTGCAGCACCACGCCGGGATTGCAGGTCGGCAAGTCGGTGGAAATGGACCCG GAAACCATGAAGCTGGCGCTGCGCATTACCTTCGGTACGGATGAAAAGAAACTCGCGGATTTGTTCCGGCGAGTGCCGCAACGGCCGTGGTATGCGCGGA ATCTGAAGGTCAAGCCGCTGAGTTCGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GCCAGGCACTTGTGGCAAGGGAGCAAGCTCCCTCGCCACACAGTTTTTGGTGACGGATAACCTCGATCAAAGCACCTGCCACCCCCCACCCAACGCCTTG TACAACGCAATGCTCGCCTGCAACCGCGACAACCGCAGTTGCACATTCGAGTCCTGCGCCGCATACAGCGTGCGCTGCGTTTCCAGCACCGTCAGCCAAT CCTCGGCGCCAGCCTGATAGCGGCTTTGCGCAATGTTGAACGCGGCCTGGGCCTGGTTCAGTTCTTCGCGTTGCCACTGCCGCTGTTCATCCAGGCCGCG AATGCTGTTGAGGGCTTTTTCGACGTCGGCAAACGCATTGATGATCGCGCCTCGGTAGGCTTCCAGCAGTTCTTGTTGGCGGGCCGTGGCCTTGTCGCGC TCGGCACCGAGGCGGCCGTTGTTGAAGATCGGTGCGACCAGCCCGGCGGTGAGGTTGTAGAACGGGCTGCGCAGAATGTCGCTGGCCGTGTTGGCGCCCG
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| Amino Acid Sequence |
>PvdJ/PvdD/PvdP-like protein
MTISRRWFMAGLALTGAAVPAAYYGHREWTKPDPTITPGEATVELADTAGQQLANSLRGIWDIRFEGSQAGLDGLPQHGLELFLDIAQRGRGLRGCLDTA QQLRGEAEPRYRVIGDLVSPDASQLYWRLIDRQSANGAPTYELAVTLDEVWADFGNAGSGTLSGRILRLDRPLGLPELDNRFVARKRLFPEARERVGLNP PLLAWLISAEHRLFHQLWHASRDKWHKLSKDQQGALRGIGWQPGPRGNERDARGPRKDRNGSGIDFFFMHRHMLGTARSMQDLPSWSSFPMPQPELERDR QGFARYFDNHDGTALPPTWLAAEDTEYTQWVSDIKTAETFHSNFQVWESRYRDPRYLSKLTLGQFGSEVELGLHDWLHMRWASVPRDPSNGQPVPFARDP ADFAARWYAPENDFLGDPFSSHVNPVFWHFHGWIDDRLEDWFRAHERFHPGELSRLEVNGVPWFAPGRWVEVDDPWLGPSTHGCSTTPGLQVGKSVEMDP ETMKLALRITFGTDEKKLADLFRRVPQRPWYARNLKVKPLSS
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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