Pseudomonas umsongensis UNC430CL58Col, N519_RS0125855
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas umsongensis UNC430CL58Col N519DRAFT_scaffold00001.1, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CAAGTACGCCGGTTCGAAGCTGAGTCACTTGATCATCGCCGACACCTACAACCACAAGGCGTCCTCGGGCTTGCGCTACATCGTCAACCCGCCGGGCGTC ACCGCCACCGTGCATCAGCACCTGGACATCGGCCAGGGCGAGGTCGACTGGGAAGCGTTTTTCGGCACCTTGCGCGAGATCAAGTTCGATGGCATCGCCA CCGTCTCTGTGTTCGCCTGGGAAGACCGGCCGGACGAGTCCAACCGGATGATGCTCGAACGCGTGACCCGCGAACTCTGCCAATAACCGCGGCATACACA AAAAACCTGTGGGAGAGGGCTTGTGTGGCGAGGGGGCTTGCCCCCGTTCGACTGCGAAGCAGTCGTAAACCAGTCACTGCTTTCTAAATTCAATAACGCG GTGATTGGTTTTAGGGGTGCTTCGCGCCCCAACGGGGGCAAGCCCCTCGCCACACAAGCTCGCTCCCACAGGGGCCGCGTTCTATAAGGAGAATACTTTC
|
|
| DNA Sequence for Gene |
>N519_RS0125855
ATGCGTATCGGACTTGTCGGTTACGGCCATGGCGGCCGGTTTTTCCATGCTCCGCTGATCAGCAGTTTGCCGGCGGCGACGTTCGTGGGCGTGGTCACCC GTTCCGCCGAGCGCCGACAACTGCTGGCCACGGAACATCCCGGTGTGCCGGCCTTCGACAGCATTGGCCAACTGGTCGAAGCCGGGATTGATGTGCTGGT GGTGTCCACGCCGCTCAAAGGTCGTCCGGCGTTGGTGCTCGACGCCATCGAACACGGGGTGGCGGTGGTCAGCGACAAGCCGTTCGCCGCCGATACGCAG CAGGCGCAAACCCTGATCACCATGGCCGAGCGTCAGGGCGTGCATTTGAGCGTTTACCAGAACCGGCGCTGGGACTCGGATTTCCTCACCGTACGCAAAC TCATCGAGTCCGGTGCCCTGGGCCAGGTCACCCGTTTCGAGTCGCGGATCGAACGCTACTCGCCACAGTCGGTGAACAACGGCAGCGGCGGTGGTTTCCT GCGTGATCTGGGCAGCCATCTGGTGGATCAGGCGTTGCTGTTGTTCGGCCCCGTCACCCGGGTTTACGCCGAACTGGATTACCTCGAAAAAGGCCAGACC TTCGACAACGGCTTCTTTATGTCCCTGACCCATGCCAGTGGCGTGATCTCGCACCTGAGTGGCAGTTGCCTGCAAAACACCCCGGGCCCGCGTTTTCGCG TGACCGGCACCCAGGGCTGCTACAGCGTCGATGGTCTGGACGGGCAAGAGGCGTCGACCCTGGCCGGGCTCACGCCCAAATCCGAGGGCGAGCGCTGGGG CGTCGAAGAGCATCGTCGCTGGGGCTGGTTCGAACAGGGCGAGGTGCGCGAGCGGGTGCCGTCCGAGCGAGGCTGCTGGAACCAGTTCTATTTGCAGCTA CAAACCGCGTTACAGAGCGGTGGCCCACTGCCGGTCGAGGCCCGTGATGCACTGGCGACCACCCGCGTGCTAGACGCTGCGCGGCTCAGTTTCGAGCGCC ATCAAGTGGTGGCGTTGAGCGCATTTGAAAGCCATGGAACAAAATCAGAATAA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
AATTCTAAAATGAGTTGATATAGAAATTATTTTCTAATAAAGTCGTTTCCAGGTTGCCGACTATCAACGTCCGATCACGCTCAAGCAGGCCTTGAACGAG TGAAGGACGCACCAAAAACAAGAAACAAAGCCAGGTACCGTCGATGAAAACCTTCAACTCTGCTCTGCATGCTTTACGTTCCGCGCTGCACCTCTCTCGC GACCTGCCTCGCGTCTCGTTTCATTCCGTCTCTCGCTTGCTTTGCGTCGAACGCAAGGGCGCCCTGGTCTGCTGCATTCCGGGAGCGCCGATAGTCCGCT TGCCCGCTTACTGAAATCGTCACGCCTTATCCATAAAACCAACAAGAATGTGGAGAAAGACCTTTCATGAAGACCAAGACCCGTTTCGCCTCACTCGCCT TGTCCCTGATGCTCGCCAGCGGTGCCGCACTCGCTGACATGAAGATCGGCGTCAGCATGGCGCAGTTCGATGACACCTGGCTGACCTATCTGCGCGAATC
|
|
| Amino Acid Sequence |
>oxidoreductase
MRIGLVGYGHGGRFFHAPLISSLPAATFVGVVTRSAERRQLLATEHPGVPAFDSIGQLVEAGIDVLVVSTPLKGRPALVLDAIEHGVAVVSDKPFAADTQ QAQTLITMAERQGVHLSVYQNRRWDSDFLTVRKLIESGALGQVTRFESRIERYSPQSVNNGSGGGFLRDLGSHLVDQALLLFGPVTRVYAELDYLEKGQT FDNGFFMSLTHASGVISHLSGSCLQNTPGPRFRVTGTQGCYSVDGLDGQEASTLAGLTPKSEGERWGVEEHRRWGWFEQGEVRERVPSERGCWNQFYLQL QTALQSGGPLPVEARDALATTRVLDAARLSFERHQVVALSAFESHGTKSE
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|