Pseudomonas umsongensis UNC430CL58Col, N519_RS0125355
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas umsongensis UNC430CL58Col N519DRAFT_scaffold00001.1, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
CACTGCTTCAAGCGCTTAATTGGAAAGGATTTTCGACTCAAGAGACGCTGATCTATAGATCAGCGTGGTACTCACCGTGCGCTACGAAATGGCCCAGCGC GCCCCAAATGGGTGAAAAATGGTACCCAGGTAACAAATCATTTCGCCGAATGCCCTCCGAAGTCTTTCGTTCCGTCACTTCAAGCGAATCCGCTTTTTTC AGCTCGGACACGCAAAGTGCAGCTCACGGCTCGGTGCATGGGAGAAATCGTCCTGGCTCAGGCTGGTGCAGGCGATCGGTTCTCAATCGGGGATTTGCAA CGGATTTGACCAGCACGTTTCGTGGACATGACCGGCAGAGAACGACCCAAAGTTGACTGTCGACAAGAGGCTGAATCAGCTCAAGCAAACAGCAACTTTT TGAGCCATGCATTCCTTTCAGGAATGCGCCACATAAAATTAATGAATTTTTATTATTGCTGTGTCTGGCGTAGCTTGATTTCAGGACATGGAGAACCGCC
|
|
| DNA Sequence for Gene |
>N519_RS0125355
TTGAAATCATCCCCTCTAAACTCAGAAAAATTTGATACCTCACGAGCCAATGAGTACGGACGACAGAGCCGTATTGCGCTAGCAGGATATGACGCCTGCC AAGACTTGGCTGCGTGCATGCTGGCGGCAAGCCTGGGCACTACAAGTTCGGCAAAAATACTTGTAGTTGGCGCTGGCGGTACGGCGCAGGAAATTGTTGC TATGGCCAAGCTTGAGCCGGGTTGGCGCTTCACCGCCGTTGATCCGTCCGAGCCGATGTTGGAGGCTGCAAAGCAGCAATTAGAGGCAAACAACTTGCTT GAAAGAACGGCCATGCATCTTGGGTATGTTGAAGACCTGGCAGCAGACTTGTCATACGACGCAGCGACCTTGATCGGAGTACTCCATCATCTCGATGGAG ATGAAACCAAGCGACAAATTTTACGATCCATTCGGGCTCATCTAAAACCGGGTGCGCCGCTGATTGTCGCGGGGAATCAATACGCTTATGCCAGCCAGCC GCTACTGCTTGCGGCTTGGGGGCAGCGGTGGCGGCAGCATGGAGCCAGCCCGGATGAAGTGAAGGTCAAGCTTGGGAAAATCCTTCAAGGCGCTGATCCT CCACATTCCGAGGCGGCGGTTCAAAAACTCCTGCATGACGCCGGATTTGGAGACGCTACCCGTTTCTTCAGCAGCCTTTTCTGGGGGGCGTGGTTGACGT GCAAAGTGGTCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
ACATGGCCTCTGGCTTCCACGCTTGAGCGAGCGCCTGTATCTCATAAATGCGGGGCATCTGTGTCTATCGAAAAGATCACTGGATGGGTACGGTCCACAG ATACCCTTTCATTGATGAGGCAACCATGTACCTAACCGTTGTTCCCTTTAGTACTACCGATTGGTCGACTGTCGAACCTCTGGAGTATGTTGGACAAACG GGTACCGCCTATTGGCGAACCTGCCAGTTTGGTTCGACGCGTGTGCGGATGGTTGAATACAGTCCTGGCTATCTGGCCGATCACTGGTGCTGGAGAGGTC ATATCCTGTTGTGCCTGGAAGGCGAGTTGCACACGGAGTTGGAGGATGGTCGTCAGTTCACACTCACCGCGGGGATGAGCTATCAGGTGGGCAGCAACGC TGAGGGGCATCGATCTTCCAGCACGACGGGTGCCAAGTTGTTCATAGTGGATTAACGCTGGAATTCACTGCTATCCACAACCCTAAGCAGACAGTGAAGC
|
|
| Amino Acid Sequence |
>SAM-dependent methyltransferase
MKSSPLNSEKFDTSRANEYGRQSRIALAGYDACQDLAACMLAASLGTTSSAKILVVGAGGTAQEIVAMAKLEPGWRFTAVDPSEPMLEAAKQQLEANNLL ERTAMHLGYVEDLAADLSYDAATLIGVLHHLDGDETKRQILRSIRAHLKPGAPLIVAGNQYAYASQPLLLAAWGQRWRQHGASPDEVKVKLGKILQGADP PHSEAAVQKLLHDAGFGDATRFFSSLFWGAWLTCKVV
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|