Strain | Pseudomonas umsongensis UNC430CL58Col N519DRAFT_scaffold00001.1, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
TTGATCGGCTGGATCATGGCCAACCTGCTGCAGGCCTTCCGTCCCTTGCAATGCTGGGCGGCACCGGCTTTTGGCAGTTTGCTGCTGATCGGCGTGTTGC CGGCCGGCATGCCGGATTCGGTGGTGGCGAACAAGATGCCCGACCAGTTCATCCTCCAGCACGCCCCGGAGCTGGCGCAAACCGACAAGCTGTTGAGCAA CGACCTGGGCGCTGCTTCGGCCCTGGCCTGGCGCTTGAAACGCCCCGAGGTGGCGTTGTACAACACGATAGGCGAATTGAAATACGGCCTCGACTATCCT GATCCAGATGCAATGCAGCAGCGGGTCGATCTCAAACACGTGCAACAGTGGATGCGCGAAGCGCGTCAGAGTGGTTCGGTCGGCGTGGTGATGCGGGTCA AAGGGGATGACGAACTGCAAGAAATCGAACTGCTACCCAAAGATGGCAAGCGTTATGAACAAGGCAACCTGGTGATTCTGATCTTCCCTCGGGATGCGTC
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DNA Sequence for Gene |
>N519_RS0122395
ATGAGCCTGTTGCTGGTACTGACCGCGTGCCTGCTGACCTGCCTGGGCCAGATCGCCCAGAAGTACGCCGTGGAAAGCTGGCGTGGCAAGACCTCGGGCT GGGGCGAGAAACTGCGTTCGCCCTGGCTGTGGCTGGCGCTCGCCTCTCTGGGGCTGGGTTTGCTGGTCTGGCTGCTGGTGTTGCAGCGCCTCGAAGTCGG TATCGCCTATCCCATGCTCAGCCTGAATTTCGTGCTGATCACACTGGTCGCCCGTTTCGTCTTTCACGAAGTCATCGACCGCCGTCATTGGTTGGGCGTG GCACTGGTGATTGGTGGCGTGGCGTTGCTGGGGCAACACGCATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCCTGCGTCGCGGAATTGCCTTTGCCATGGGCAGCGTAGTGCTGGGCACCGCCGCGCAGTTGGGCATGCGCTGGAGCATGACTCGATTGCCACATCCCGA ACAGTGGTTAGCGGCCTTGAGCAGCGGCAGCGTCGATATGCCCGCTGTGATTGTCGTGCTGGCCGCCATCCTCGCCTATGCCGTGTCGATGCTCACCTGG CTCGCCGCCCTGCGGGATGTGCCCCTGGGTCGTGCCTATTCGCTGCTGAGCATCAGCTACGCGCTGGTGTATGTGCTGGCCGCCAGCCTGCCGCTGTTCA ACGAATCCTTCAGTCTTTCAAAAACCCTGGGAGTGGCGCTGGTCATCCTCGGTGTTATCACTATTAATTCTCGACCTGCTCGCGCGCCCGAACTTAGGAG TGCATCATGAAAATCAGTGTATTTGGTAGCGGTTACGTTGGTCTGGTGCAAGCCGCCGTCCTGGCCGAAGTCGGCCACGATGTAGTGTGTATGGACATTG
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Amino Acid Sequence |
>4-amino-4-deoxy-L-arabinose-phospho-UDP flippase subunit E
MSLLLVLTACLLTCLGQIAQKYAVESWRGKTSGWGEKLRSPWLWLALASLGLGLLVWLLVLQRLEVGIAYPMLSLNFVLITLVARFVFHEVIDRRHWLGV ALVIGGVALLGQHA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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