Pseudomonas umsongensis UNC430CL58Col, N519_RS0121360

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas umsongensis UNC430CL58Col N519DRAFT_scaffold00001.1, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
TCACAACGCTGATTAGGGCCAGCGCACAACAGAAGGAATCGCAGTCGTGGGGACTTTTCGTAAAGGCTTTACGCGCTTGATGCTGCTCGGATGTGCCACC GTCTCACTCCTCAGTTTTGACGTTCAGGCTGAAGGCAATGGCGTCATCGTACTCACCCGTGATGTACAGCCCCACACCGTCGGCAGGCCGCCGTTCCAGA AAGACCCCTACCCGACCACTGTCAACGCCAACCCTTCGGATCGTGTCACCTCGACACTCAACAGCACCGAACTGAGCGATGGTGAGTTCGCCAGCGTGGC CAGCGGTTCGTCCATCAGCAACAGCATCAACCAGAACGGCAATATACCCGGCAGCCTCAATGTCGTGACCAATCCCAATGGCATGCCCGGCATGAGCGCC GGTCACGGCGGCGGTAGCGGTGGCGCGATTTCGGGAACGATCAACCATGCCATGAGTTCCGGCCTCGCGCCGTTGGGCAGACTGGCGGGAGGTCAATGAC
DNA Sequence for Gene
>N519_RS0121360
ATGAGCCGCTCCCTGATCCTTCTCGCCCTGGTCATCGGTGCCAGTGTGAGCCCAGGCGCCATGGCCGACTCCAGCGTTCCGGTGGTCAACACCGCCAACA TCCTGGATTCCGGCGCCCGGTACAACGGCAACTTCAACGTCAACCAGGCCTCCGGCGATCAACAGCAACAGGCCAACACCCGCGCTATCGCCATCGGCAC CGATGCCTCGGCGACCACTCGTGTCATCCAGAAACTCGACACGCCCGCCAACCCGTCGATGAACGCGACGACCACCATCGGCGGCAACTCTTTCAGTCAA GGCAACGGTGCACTGGGTGTCAACCAGGGCGCCGGGGCCAATAACCAGATGGCCAACGCAATGCGCATCAGCATCAGTGCTGCGCCGCAAAGCGTCGACG ATAGCGCCCTTTCTCAACAGAACGTGGCGTTGTTACCAAGCTCAGGGGCAACTGACGCTTCAAAAGGCAGTCGCCAGGTCGTGACAAGCGACCAGGCCTT CACCGGCAGCCGAGGAGTGATTCAGGTGAACCAGAGTGCCGGGGTGGGGAACCGAATGGCTAACACCCTGAGCATACGGGTCGCTGACTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
CCCGAACGCAGTGCGATTAGAAAGTAACCAACACTTAACCAACTAATAAGCACGGAGAAACACCATGAAACCCACAATGGCTCTCAAGCCTCTCGTCTTC GCCCTGGCAGCCGTCATGGCGATGGCTGCGCAAGCCAACGATAACGATCACGACGGTGGTCACGGCCACCATCATCACGGCCCCAAAGGCCCAACCTGGG AACAGCAACTGTCAATCGACTCCGCCGCCAGCGCCTATGTAGGGGATACACAGGACAGCAGCGGCAACTCGGTACTCAACCAAGGCACCAACAACACCGC CGAGGCTGACAACTCGCTCAACGGTTCCAACGGCAACATGGGCGCCAACGTCGCGGGTGGCGATGGCAACCAACAAGACAACGCCGCCGCGCTGGCTACC GCTGATGAAAGTTTCATCTTCGGTTCTGCCGAGGCAACCTCCACCGCGTATCAGTACAACACCAATAACTACGTCAAAAACCGCTCTACTCAAAATAACG
Amino Acid Sequence
>autotransporter adhesin
MSRSLILLALVIGASVSPGAMADSSVPVVNTANILDSGARYNGNFNVNQASGDQQQQANTRAIAIGTDASATTRVIQKLDTPANPSMNATTTIGGNSFSQ GNGALGVNQGAGANNQMANAMRISISAAPQSVDDSALSQQNVALLPSSGATDASKGSRQVVTSDQAFTGSRGVIQVNQSAGVGNRMANTLSIRVAD
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site