Pseudomonas umsongensis UNC430CL58Col, N519_RS0120500

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Sequence Data

Strain Pseudomonas umsongensis UNC430CL58Col N519DRAFT_scaffold00001.1, whole genome shotgun sequence. [Details]
DNA Sequence Upstream of Gene
GAAACCTTGCTGTTCACGCCGTGGCCGGGCCAGTCCACTTGGCAGGAAAAACCCCTGGAATCGCGAATGTACGCCAGCCGTCAGGCCGGCGAACGTATAC CGTTGGCGATCAAGGAGCTGCTGGATGAGCAGCTTCCCACCACGCGCGATCTGGCCAATGTCTATTTGCAGTGCCTGGTGCTGGGTTTTCAAGGGCGTCT GCGGGGCGAACAGAATCAGGCCCAGCATGAAAAATGGCGCCTGGCGCTGTTCACCTTTGCCTGGCAGCACGAGGCGGATTATGCCGACGTCAGTGCCCGG CTCGAACAACCTTCAGCGGTGACGCCGCTGCAATTGCCGGTGCGTCTTTCGTTGCCCGATGGCTTTCGCCTGGGGTTGGGAATTCTTGCCGTGGTCCTGC TGCTGACCGGTTTGGGGCAGTTGTTCTGGCGTGACATTCGCCAGGAGCTCGAACCGGTCTTGCAACTGACCGATTCGGTGGCCACCTCGGAGCAAGACTC
DNA Sequence for Gene
>N519_RS0120500
ATGAGCACGCTGGGGATTATCGGCCTGATCATCGTCGTGCTGTTGGTGCTGGCGATCGTCGCCGTGGCGGTCTGGTGGTTGCGCACGCAAAGCGGCGCGG CGATCCGCAGTTTTTACCTGGCGGTGCGGCAGATGGAGCAGGAGCAGGGCACCCGGGATCGTTACCAGATTCCCTGGCTGCTGATGCTCGGCAACGAGAC TCAGGGCACGCAGTTGTGCACCCAGTGGCGCTTGCAGCCCACCGACAAACCGAGCTGGTTCGGTCGCTGGTGGTCGGACCCCGAAGGGGCGGTCCTGGTG GTACCCCAGGCGCTGTTTTTGCCGGATGAAGGCATGCACCTGCAACGGGGTGGCTGGTGGCGCTTGCTGGGGTTGATCCTGCGCTTGCGCAGTCAGCGTC CGCTGGACGGCGTGATCTGGACGGTGCCGATCAGTCGGCTGGGCAATGCCGAGCAGGCGGCGGCCCTCGGCCTGGCGGCGCGTCGACGTTTTATCGATCT ATTGCAGCGCTTCGGTTTGAGCCTGCCGGTGTACGTGGTCGTTACCGGCATGGAAGAGTTGCCGGGTTTTCAGGAGTTGATTAGCGCGCTGCCGGTCGAG GCTCGCGAACGTACGCTCGGCTGGTCCTCGCCCCACGGGCCCGATGCGGTGTGGCAAGCGCAATGGAGCGATCAGGCGCTGGATCAGGTCAATCGGGCCC TGGCGGAATCGATCATCGAAATCGGCGCCTTGTCCGGGCAGTTGAGCATTGATCTGTATGGCTTGCCGGAACGCTTCGAAGCCTTGCGGCGCAATCTGCA ATCCTTGCTGGAACCGGTTTTCCAGGGTAATGCGCAAGGCGAGGCGCCACGTTTTCGCGGTGTCTATTTCACCGCCAACCAGCCCTCGGACGACAGCGCT GACGGGTTTTCGGCCTACGACACCGGCTTGCAGCAGAGTGCTTTCGCCCGGCAACTGTGGCAGCGGCGGGTGGTCGCCGAGCGCGGTCTGGCTCAGGTGG TGCCGCGTCTGTTACGCCTGCGTCAGCGCTGGCAGCGCGTGACCGGTGGGGTGGCGCTGGTGGTCGCGCTGCTCTGGGGCGCTGGCATGCTGTGGGTGTG GCAGGACTCGGAAAAGGATGCCCATGAGTTGTCGCGCCTGATGCAAGGGGCGCAGAAAAATTACGTGGCGGTCACGGATGAATCTCATCGGCGGGAGGCG ACCCGGCGCAACGTCCAGGGTTTCTGGCGGGTGCTGGAGAAGGCGCAGCGCTGGCGCTTCACCTCGGTGGTGTTTCCGACCTCCTGGTTCTCCTCGCTGG ATGCGCAGTTGGAGAACGAATTGCGCCTGACCGCACATAGTCACTTGTTGTTGCCGCTGCGCGATCTGTTGAGCGCGGATCTGGCGCAACTCAAGACCAT TCGCAACACCGAACGACGGGGCAACGTCGAAAGCGAAGACCCGGCCCAATGGCAAAACTACGTCAAGGCCACGGAGCTGGTCGAGCGTGCGGTGAGTCTG GAGCAGCAGAACCAGTGGTTCAGTCAGGCGCTGAACAACACCAAGGCGCCGCTCGAAGACCTGGTGTTGCTGAGCAACAACGCCCTGTCGCTGAACCTCA ACGCTGGCACGTTGCATCGCGTCGGTTTTTACAACCGGGCGCTGCTGGATGTCGACAACAGTGAGTTGAAACCACTTGACCTGACCGTCGAGCGCGCGCA GATCGAGGAAAACTTCCTCGGGCTCATGGAGCGCTGGCTGGACCAGTATTTCCTTGCCGATAACTTTGTCCGCCAGGCCGGTTATCTGCGTTTGCACCTG GAGCGGCTGGAGGCCGGCAGCGGCAATTCCCTCACCGAGCTGGAAGATTTGCGGGCGTTGATCGACGACCTGCAAGCGCTGGTCGGCTTGACCAACTCGG CGTGGAGCCGGGGCAAGGGACAGGATCTGGTGCCAGGTTACCGGGCGATGATGGACAAGGTGCGCCAAAGCACATTGCTTGGCCCGCAGGTCGAACAGCA ACTGGATCAACAGGCGTCGAAGTTGCAGCAGAGCTTTCGTGACCAGTGGATCACCCAGGCCGGGGCCAGGGACAATTTGCTGATTCAGCAAGGCAGCGGG CAACTGGTCTTGCAGGAGCATGTGGTGCAGTTGAACAACGCCGTGCAGGCACTGTTCAAGCGTGATTTTGTCGCCATCGCCTTGCAGGCGGATCAGTCCG ACGTCCCGGATGGGCAGGGGCGTGGTGTTGATGGCGACGACCTCGACAGTGCGCTGAACTACTTCGCCAGTTACAAGAGTTACGCCGCCGAAGAGCTGCC GCGCATCCCCCCGGCGTATCGTGGCGCGTTGCTGCAAGCGGCCGAAGGCGCGGTGGTCAAGGCCATGTTGTCGAGCCTGCGCGAGCACAATGCGCAGGTC CACAGTGGTGTCTTCAATGTGCAGGCCTCTCAGGCGATTGCCTTGCAAAAGGCCTTTGTCGAGGTGCGCCGCAGCGATCTGGCCACACGTTTGCAAACCG CTTTGAACCGCCGCGCCCTGGCCGACATCGTCAGTGGCCTCGATGAAATCGTCGCCCAGCCTCTGTTCAGCGGGCGCACCGAAATCAGCCAGTGGGACGG CTCGAAGAACTTCGGCCTGCAACTGTACGGCGCCAATGACGTGCAGGATCTGAAACTGAGCCTCAAGCAGCAGTTCAACACCATGCTCGGCATCACCGAA CGCCGCACTTCGGCGCTGGAATGGCTGAAAGTCCAGCAACAGAACCTCTCGGCGCTGGATTACGAACGGGTGACGCAGTTCAGTGCGCTCAACGATGAAC TGCTCAAATACAAAGAACAGAACCCCGCCAGTTCGCCAGCGCAGATCGAGCAGTTGGTGAGCCGCGACTTCATCGAAATGGACGTCGCGTCCTGCGGGCA GATTCTGCAAACCGCCAACCTGTCCGGCGGGCGCGGAACGTTGGCATTGCGCGCCGTGGATCTGCAACAAACCGCCATGCAACGCTGCCAGTTCCTGCAA CAGCAGCAGGCGGCGGCGGCCTGGAATGAGCTGGCCAATTATTTCAACCAGTACCTGGCAGAGCGCTTTCCGTTTGCCAATGGCTTGCAGGCCAGCGACG CCGACCCGGCCCGGGTCCAGCATTTGCTGGAGCTGATCGACAAGCGTTTGCCGGTGGCGCAGGCCGGATTGGCTCTGAGCCAGACCCCGGAACGCCTGGC CGCCGAGGACTTTCTCAATCGTCTGAAGCAAGCCAGTACCTGGCTGGGGCCGATGTTCGTGCGCGACAAGAGCGGCGTGCTGGGGGTGGAGATGGATGTG CGCTGGCGCACCGATCGAGAGGAAGAGCGCGGTGCCGACCAGGTAATTGCCTGGGGCTTGAATGCCGGTAATCAACAGATCAGCTACCCTGGCGAGGCTC AGCAGAACCTGCGCTGGATGGTCGGCCAACCAGTCCGGCTGACCTTGCGTTGGGCCAGAAATGGCTATCAGCGTCCGGCCAACGATCCGTTACAGCCGAG CCTGGTGGTGCGGGATCTGGAAGCGGGTTGGGAGTACAGCGGTCCATGGTCGCTGTTGCGCTTGATGCGTTCGCACATGTCGGTGCAACGCCAACCCAGC ATGGACTACACGGATTTTCCGTTGACCTTGCGCCTGCCCGTGACCACGCAGGCCAGCGCAGCGGAGCAAACCCTGATGTTTGTGCGCCTGTCGTTGATGA CCCAGGGCTCGAAATTGCCGTTGTCCATCCAGCCCTTGCCGACCCGGGCTCCGCGTTCACCGTTCCTGGTGACGCGCTCAACCGCGGCGATTGAATCCCA TGAGGAGGAGGGCCTGTGA
BLASTN Search  |  DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
DNA Sequence Downstream of Gene
ATCAACCATCAACACCGTTGCCGGAACTGATTGCGCAACTGCTCGAACCGATCAGCAAGGAGGCGCCTTGTGGTCAGGATTTGCGTTATGAACCCGAGTT CGACCGGTTGCGCGAATTGCGCCGCGAGGATGACACCAGTTTGCCGACGGGGGTGTGGCAGTCGTCGATCAAGCGCGCCCAGTGGCCGGAACTGGAAAAA CTGGCCACGAGCCTGCTGCTCGAACGCAGCAAGGATTTGATGCTCAGCGCCTGGCTGGGGGAGGCCTGGCTGCATCAGGACGGTCTCGATGGGTTGCCGG GCAGCCTGGCGCTGGTGGCCGGGTTGTGCGAACGCTATCCCGAACACCTGCACCCACAGGCTGAGGATGGCGACCTGTCGTGGCGAGTGATACCGCTGGA ATGGTTGGCTCGACGCTACGCTGAAGTGTTGCTGACCCGAGTGCCGCTGTTTGAACCGCACAACCACGAATTCGATGGTTTCTGTCTGGACGCCTGGCGC
Amino Acid Sequence
>type VI secretion system protein ImpL
MSTLGIIGLIIVVLLVLAIVAVAVWWLRTQSGAAIRSFYLAVRQMEQEQGTRDRYQIPWLLMLGNETQGTQLCTQWRLQPTDKPSWFGRWWSDPEGAVLV VPQALFLPDEGMHLQRGGWWRLLGLILRLRSQRPLDGVIWTVPISRLGNAEQAAALGLAARRRFIDLLQRFGLSLPVYVVVTGMEELPGFQELISALPVE ARERTLGWSSPHGPDAVWQAQWSDQALDQVNRALAESIIEIGALSGQLSIDLYGLPERFEALRRNLQSLLEPVFQGNAQGEAPRFRGVYFTANQPSDDSA DGFSAYDTGLQQSAFARQLWQRRVVAERGLAQVVPRLLRLRQRWQRVTGGVALVVALLWGAGMLWVWQDSEKDAHELSRLMQGAQKNYVAVTDESHRREA TRRNVQGFWRVLEKAQRWRFTSVVFPTSWFSSLDAQLENELRLTAHSHLLLPLRDLLSADLAQLKTIRNTERRGNVESEDPAQWQNYVKATELVERAVSL EQQNQWFSQALNNTKAPLEDLVLLSNNALSLNLNAGTLHRVGFYNRALLDVDNSELKPLDLTVERAQIEENFLGLMERWLDQYFLADNFVRQAGYLRLHL ERLEAGSGNSLTELEDLRALIDDLQALVGLTNSAWSRGKGQDLVPGYRAMMDKVRQSTLLGPQVEQQLDQQASKLQQSFRDQWITQAGARDNLLIQQGSG QLVLQEHVVQLNNAVQALFKRDFVAIALQADQSDVPDGQGRGVDGDDLDSALNYFASYKSYAAEELPRIPPAYRGALLQAAEGAVVKAMLSSLREHNAQV HSGVFNVQASQAIALQKAFVEVRRSDLATRLQTALNRRALADIVSGLDEIVAQPLFSGRTEISQWDGSKNFGLQLYGANDVQDLKLSLKQQFNTMLGITE RRTSALEWLKVQQQNLSALDYERVTQFSALNDELLKYKEQNPASSPAQIEQLVSRDFIEMDVASCGQILQTANLSGGRGTLALRAVDLQQTAMQRCQFLQ QQQAAAAWNELANYFNQYLAERFPFANGLQASDADPARVQHLLELIDKRLPVAQAGLALSQTPERLAAEDFLNRLKQASTWLGPMFVRDKSGVLGVEMDV RWRTDREEERGADQVIAWGLNAGNQQISYPGEAQQNLRWMVGQPVRLTLRWARNGYQRPANDPLQPSLVVRDLEAGWEYSGPWSLLRLMRSHMSVQRQPS MDYTDFPLTLRLPVTTQASAAEQTLMFVRLSLMTQGSKLPLSIQPLPTRAPRSPFLVTRSTAAIESHEEEGL
BLASTP | DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site