Pseudomonas umsongensis UNC430CL58Col, N519_RS0107755
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas umsongensis UNC430CL58Col N519DRAFT_scaffold00006.6_C, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
ACAATCTCGTCCACAAAACCCCGCCCATTGCTCTGCAAGCCCCGTCTTACCTGGCTTGCAACGTATCAGCCGCGCTTAACCGGGCGAACACCCTGATCTC ACCGTCAAAAACCAGCCGAAACAGGCGAAAAAAAAACTTCCTCCGCCAAAGCCCTGTAAACCCTCGCTCCAACCTGAAAACGCCCCTCGCCAAGCCCTCC AGGTGCCATTTCGCCGCACCACGGGGCCGAAAATTTCCTTATAATGCGGACTTAAACGGGCCTGCAATATTCCCTTACAGGGGTGAAAAGCCAGTCTGAA GCCCACGCAGAGCGGTTCACGCTTTCTGCGCCCATCAGCGGCTTCGGAACACCCGTACAAAATTCTGTTTATTGCCTGCGTTGTACTGCTGCAACAAACG ATTTCCTTTAGATCCAACGCGGCCAGAACCGGCCGTGTGAAAAACCAACCTATCAGTTTTCACACGGGCAATCTGGCCCTCACGCAGGAGACGACACGTC
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| DNA Sequence for Gene |
>N519_RS0107755
ATGCTGAGCTGGGACGAATTCGACAAAGAAGATGACGGCGAAGCCGCTGTAAAAGGCGCCAATGCCGGCCACGCTTCTGAAGCCAACATGGACCGCCTCG ACAGCGCCGGTGGTGCCGCCGCTCAAGAGGCCCGCGCCGTGACCGCGACGGACTCCGCCGCCATCGCCCGCGCCAAGGCTGCCCTGGATTCCCTCGACGT CGCCGAAGGCCTCGCCGAACTGGAAGGCGCCTCTGCCCGTGTAGCTGTCGATGAAAAGCGCATGATCAACTGCCGCGCCGACCTCAACCAGCTCGTACCA TTCAAATACGACTGGGCATGGCAGAAGTACCTGGACGGCTGCGCAAACCACTGGATGCCGCAAGAAGTCAACATGACCGCCGACATCGCCCTCTGGAAAA ACCCGGAAGGCCTGACCGACGACGAGCGCCGCATCGTGATGCGCAACCTCGGCTTCTTCTCCACCGCCGACTCCCTGGTTGCCAACAACCTGGTCCTGGC CGTGTACCGCCTGATCACCAACCCGGAATGCCGCCAGTACATCCTGCGCCAGGCCTTCGAAGAGGCGATCCACACCCACGCCTACCAGTACTGCATCGAA TCGTTGGCCATGGATGAAGGCGAGATCTTCAACATGTACCACGAGATCCCATCGGTCGCGAAAAAAGCCACCTGGGGCCTGAAATACACCCGTTCGATCT CCGATCCGAAGTTCGAAACCGGCACCGTCGAAACCGACAAAGAGCTGCTGCGCAACCTGATCGCCTACTACTGCGTTCTGGAAGGCATCTTCTTCTACTG CGGCTTCACCCAAATCCTCTCCATGGGCCGCCGCAACAAAATGACCGGCGTCGCCGAGCAGTTCCAGTACATCCTGCGCGACGAATCCATGCACCTGAAC TTCGGCATCGACGTGATCAACCAGATCAAAATCGAAAACCCGCACTTGTGGGATGCCGAGATGAAGGAAGAAGCTTCGCAGATGATTCTGCAGGGCACTC AGCTGGAGATCGAATACGCGCGGGACACCATGCCACGCGGTGTACTCGGCATGAACGCGGCGATGATGGAGGACTACCTGAAGTTCATCGCTAACCGTCG TCTGTCGCAGATTGGTTTGAAGGAAGAGTATCCAGGGACGACTAACCCGTTCCCTTGGATGAGCGAGATCATGGACTTGAAGAAAGAGAAGAACTTCTTT GAGACTCGGGTTATCGAGTATCAAACCGGCGGTGCACTTAGCTGGGATTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TTCCTGAGCTAGCCGTGATTTGACGATGTAAATCGAAAAATCGAATTGCAAGAGGCCCCGATCTGATCGGGGCCTTTTTATTGGGTAAGAAAATTCTCAC TAATTTCGACCTTCGCTACTAAAACTCCTACAACAATTCCAGCACCGTCCGCATTGATGTCGTTTCAGAGCATCTCTAAGCTCTATAGCAGGTGCCTAAG AAACGCCCAACGTAGAAGCTAACTTCCTTTCCTCAGTACGCGCGCTGATATCAGCGATATACGCGTAATCCTGTGAGTGGGAGAAACAGCCTGTTGGGAT TTCTTAGATCCTCTACGTCGGGTTCCGGCCCTCTTCCACTCATACGTAGAGGTAATGGATATGCCTGCAGAAGCTCCACACCGATCGGTCATGCGTGATC CCTTTAGGCCGACGATCTTCACCCGCCACAACCTCCACCTCCATGCTCTCCTCCTTGAAAACCAGCCATGGTTCTGCGCCCGCGATATTGGCCGTTTGAT
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| Amino Acid Sequence |
>ribonucleotide-diphosphate reductase subunit beta
MLSWDEFDKEDDGEAAVKGANAGHASEANMDRLDSAGGAAAQEARAVTATDSAAIARAKAALDSLDVAEGLAELEGASARVAVDEKRMINCRADLNQLVP FKYDWAWQKYLDGCANHWMPQEVNMTADIALWKNPEGLTDDERRIVMRNLGFFSTADSLVANNLVLAVYRLITNPECRQYILRQAFEEAIHTHAYQYCIE SLAMDEGEIFNMYHEIPSVAKKATWGLKYTRSISDPKFETGTVETDKELLRNLIAYYCVLEGIFFYCGFTQILSMGRRNKMTGVAEQFQYILRDESMHLN FGIDVINQIKIENPHLWDAEMKEEASQMILQGTQLEIEYARDTMPRGVLGMNAAMMEDYLKFIANRRLSQIGLKEEYPGTTNPFPWMSEIMDLKKEKNFF ETRVIEYQTGGALSWD
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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