Pseudomonas umsongensis UNC430CL58Col, N519_RS0103880
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Molecular Function | GO:0030170 | pyridoxal phosphate binding |
Inferred from Sequence Model
Term mapped from: InterPro:TIGR00044
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
|
|
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Pfam | PF01168 | Alanine racemase, N-terminal domain | IPR001608 | Alanine racemase, N-terminal | 10 | 227 | 1.1E-33 |
| PIRSF | PIRSF004848 | YBL036c_PLPDEIII | IPR011078 | Pyridoxal phosphate homeostasis protein | 1 | 232 | 3.2E-75 |
| CDD | cd06824 | PLPDE_III_Yggs_like | - | - | 3 | 226 | 0.0 |
| SUPERFAMILY | SSF51419 | PLP-binding barrel | IPR029066 | PLP-binding barrel | 1 | 225 | 5.76E-82 |
| Hamap | MF_02087 | Pyridoxal phosphate homeostasis protein. | IPR011078 | Pyridoxal phosphate homeostasis protein | 6 | 226 | 34.016247 |
| FunFam | G3DSA:3.20.20.10:FF:000004 | Pyridoxal phosphate homeostasis protein | - | - | 1 | 226 | 4.2E-103 |
| Gene3D | G3DSA:3.20.20.10 | Alanine racemase | IPR029066 | PLP-binding barrel | 1 | 231 | 3.7E-90 |
| PANTHER | PTHR10146 | PROLINE SYNTHETASE CO-TRANSCRIBED BACTERIAL HOMOLOG PROTEIN | IPR011078 | Pyridoxal phosphate homeostasis protein | 3 | 230 | 8.4E-68 |
| NCBIfam | TIGR00044 | JCVI: YggS family pyridoxal phosphate-dependent enzyme | IPR011078 | Pyridoxal phosphate homeostasis protein | 1 | 227 | 3.7E-78 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.