Pseudomonas umsongensis UNC430CL58Col, N519_RS0103805

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0016310 phosphorylation
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00344
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Cellular Component GO:0005737 cytoplasm
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF02895
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0007165 signal transduction
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01584
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004673 protein histidine kinase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF02895
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0000160 phosphorelay signal transduction system
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:1.20.120.160
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0000155 phosphorelay sensor kinase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF02895
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0016772 transferase activity, transferring phosphorus-containing groups
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PR00344
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006935 chemotaxis
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF01584
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1214 1313 9.8E-14
Gene3D G3DSA:3.30.565.10 - IPR036890 Histidine kinase/HSP90-like ATPase superfamily 1499 1685 2.9E-51
SMART SM00073 hpt_2 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 6 103 0.7
CDD cd00088 HPT IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 627 725 1.73521E-8
CDD cd00088 HPT IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1212 1310 1.66571E-12
CDD cd00088 HPT IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1070 1168 6.60106E-13
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 10 106 5.3E-8
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 767 889 5.23E-20
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 1646 1664 2.5E-9
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 627 762 1.2E-27
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 909 1036 6.0E-12
Pfam PF01584 CheW-like domain IPR002545 CheW-like domain 1691 1820 5.6E-22
SMART SM00073 hpt_2 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1070 1167 2.8E-6
Coils Coil Coil - - 1462 1485 -
Coils Coil Coil - - 823 843 -
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 770 855 1.3E-12
SMART SM00073 hpt_2 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 766 863 3.8E-5
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 14 129 2.7E-11
SMART SM00073 hpt_2 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1212 1309 9.1E-9
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 1066 1199 1.1E-27
Coils Coil Coil - - 1392 1419 -
FunFam G3DSA:3.30.565.10:FF:000016 Chemotaxis protein CheA, putative - - 1501 1685 4.7E-60
Gene3D G3DSA:2.30.30.40 SH3 Domains - - 1760 1820 8.6E-20
SMART SM01231 H_kinase_dim_2 IPR004105 Histidine kinase CheA-like, homodimeric domain 1361 1500 4.6E-13
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 1070 1189 6.54E-27
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 627 750 1.01E-26
Gene3D G3DSA:3.40.50.2300 - - - 1848 1967 5.9E-41
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 432 556 1.94E-14
SUPERFAMILY SSF52172 CheY-like IPR011006 CheY-like superfamily 1845 1964 2.28E-37
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 1211 1344 2.6E-30
SUPERFAMILY SSF50341 CheW-like IPR036061 CheW-like domain superfamily 1685 1818 1.57E-23
SMART SM00073 hpt_2 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 627 724 3.3E-6
CDD cd00088 HPT IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 770 836 3.02849E-9
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 1670 1683 2.5E-9
SUPERFAMILY SSF55874 ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase IPR036890 Histidine kinase/HSP90-like ATPase superfamily 1502 1683 1.03E-34
Gene3D G3DSA:1.20.120.160 HPT domain IPR036641 HPT domain superfamily 763 895 4.5E-18
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 908 1030 7.06E-14
Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase IPR003594 Histidine kinase/HSP90-like ATPase 1549 1685 2.1E-13
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 1212 1332 4.97E-28
SMART SM00260 chew_2 IPR002545 CheW-like domain 1678 1822 1.9E-26
Pfam PF02895 Signal transducing histidine kinase, homodimeric domain IPR004105 Histidine kinase CheA-like, homodimeric domain 1362 1499 3.0E-6
SMART SM00448 REC_2 IPR001789 Signal transduction response regulator, receiver domain 1846 1959 1.5E-35
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 629 714 3.0E-13
PANTHER PTHR43395 SENSOR HISTIDINE KINASE CHEA - - 628 750 0.0
SMART SM00387 HKATPase_4 IPR003594 Histidine kinase/HSP90-like ATPase 1545 1686 3.3E-23
Pfam PF00072 Response regulator receiver domain IPR001789 Signal transduction response regulator, receiver domain 1848 1959 9.2E-27
Pfam PF01627 Hpt domain IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain 1072 1162 5.8E-14
CDD cd17546 REC_hyHK_CKI1_RcsC-like - - 1848 1959 1.39206E-32
Coils Coil Coil - - 724 744 -
SUPERFAMILY SSF47226 Histidine-containing phosphotransfer domain, HPT domain IPR036641 HPT domain superfamily 7 130 1.24E-22
PRINTS PR00344 Bacterial sensor protein C-terminal signature IPR004358 Signal transduction histidine kinase-related protein, C-terminal 1590 1604 2.5E-9

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.