Strain | Pseudomonas umsongensis UNC430CL58Col N519DRAFT_scaffold00004.4_C, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
GGGTTTGTCCGGTGCGACGATCCTGGGTGATGGTCGGGTGGTGCTGATTCTCGACTTGCTGGCACCGATCCGCGCGATGCAAGCGCAGGTGCCGCAACGG CCGGTGACCCAGGACATAGAGCCCGAGGCGCAACGGCCGTTGCTGGTGCTGGTGGTCGATGATTCGGTCACCGTGCGCAAGGTCACCAGCCGTCTGCTGG AACGTCACGGCATGAACGTGCTGACCGCCAAGGACGGTGTTGACGCCATGCTGCTGCTGGAAGAGCACATGCCCGACCTGATGCTGCTGGACATCGAAAT GCCACGCATGGACGGCTTCGAAGTGGCGACCCAGGTGCGCGCCGACGAACGCTTACAGCATCTACCGATCATCATGATCACCTCCCGCACGGGTCAAAAA CACCGCGACCGCGCCATGGCCATCGGCGTCAACGACTACCTCGGCAAGCCGTATCAGGAATCGGTGCTGCTCGACAGCATCGCCCGCTGGAGCAAAACCC
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DNA Sequence for Gene |
>N519_RS0103800
ATGCATGAGCACCGCTCCAGCAACCTTACCGGCTTGCTACTGCCTTTGGCCGACCGCAACTTGATCCTGCCCAACGTCGCCGTCGCTGAACTCATCGACT ATCAGCCGGGGGCTTTCGATCTCGATACACCGCCGTGGTATCTGGGGCGGGTGACGTGGCGGGAACGGCAGATTCCGTTACTCAGTTTTGAGTCGGCGTG TGGCAGCAAAGTGGTGATCGGCGAGCGGGCGCGGATCGTCATCCTCAACGCCCTCGGCGGGCGGCCTGAGTTGAAGTTCATTGCGCTGCTGGTGCAGGGG ATTCCGCGTTCTTACAAGCTCGATAGTCAGTTGAGTTATGTCGACGTGCCGTTGTGTTCGCTGGAAAAGGCGGCGGTGCAGGTGGGGGAGCAAGTGGCCA AGGTGCCTGACTTGCTCGCGCTGGAGGAACTGCTTGTAAGTGCGGGTCTGGTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CCGGATCCCTGTGGCGAGGGGGTAGTGCGTTAAACCCCGGCCCGAGCCTTCATCTGCAACGACTCATGATGATCCAGCACCCGCTCCACCAACAACTGCA CGCCATCGGCCAAACGGCTGAGCGCCAAGGCTACAGAGCGGCGTGAGCCTTCCACATCGTCCGCCAGATCGGCAGCAATGGCGCTAATAGACAGCAGGTC TTCGGAGGCGTTGGCCAGAAGGGCTTCGGTGTCGATGTCGGGGGAGACGCTGAAGAGGCGGAGTTTGCGGCGTTTGGCCGGTTTTTCGTGGAGCGGAGGG AAGTAATGGGAGAGGGCGCGGTCGGCGGCTTCCTTCATTTTTTCTGCGTCGAGGGATGCTTGGGAATCAGTGTCGGTTTCCGGGGGATTGGGAGTAGCTT TGAACATAGTGAAGCTCCATTTAATGAGTTTCAGCTGCTCCATCGGGTTCCAATCGAAGGGGTGGCAGCTGTACGCGGGCTGGAACCCGGGCAAACGGAC
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Amino Acid Sequence |
>chemotaxis protein
MHEHRSSNLTGLLLPLADRNLILPNVAVAELIDYQPGAFDLDTPPWYLGRVTWRERQIPLLSFESACGSKVVIGERARIVILNALGGRPELKFIALLVQG IPRSYKLDSQLSYVDVPLCSLEKAAVQVGEQVAKVPDLLALEELLVSAGLV
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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