Pseudomonas umsongensis UNC430CL58Col, N519_RS0100490
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|
Functional Classifications Manually Assigned by PseudoCAP
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Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Pfam | PF01497 | Periplasmic binding protein | IPR002491 | ABC transporter periplasmic binding domain | 23 | 237 | 1.8E-27 |
| NCBIfam | NF038402 | NCBIFAM: helical backbone metal receptor | - | - | 22 | 216 | 3.7E-14 |
| Gene3D | G3DSA:3.40.50.1980 | Nitrogenase molybdenum iron protein domain | - | - | 140 | 263 | 9.0E-31 |
| SUPERFAMILY | SSF53807 | Helical backbone metal receptor | - | - | 20 | 265 | 4.71E-56 |
| Coils | Coil | Coil | - | - | 128 | 148 | - |
| CDD | cd01144 | BtuF | - | - | 21 | 260 | 4.45144E-68 |
| Gene3D | G3DSA:3.40.50.1980 | Nitrogenase molybdenum iron protein domain | - | - | 18 | 138 | 4.2E-28 |
| PANTHER | PTHR30535 | VITAMIN B12-BINDING PROTEIN | - | - | 19 | 266 | 2.2E-39 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.