Pseudomonas aeruginosa PACS2, A0K_RS10455
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa PACS2 chromosome, whole genome shotgun sequence, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GGCGGCGAGCTGCGCCAGATCACCCACCAGGGGCCGATGCTGCTGCAGGCGCAGAAGAACGACATCCGCCTGGAGGCCGAGCAGAGCGTGGAGGTCAGCG CCAGCCAGCAGCACGTGCTGGTCACCGCGAAGGAGCACATCACCCTGATGTGCGGCGGCGCCTACCTGACCCTCAAGGGCGGCAACATCGAGCTGGGCAT GCCCGGCAACTTCGTGGTCAAGGCGGCGAAGCACAGTCATGTCGGTCCCGCTCATGCATCGACCAGCTTCAACGCCTGGGATTCGACACCGTTCGATGAC CGATATGTCCTGCGCGACGAAGCCACGCTGGAGCCGTTACCCAATATCGCCGTTGAAGTGATACGAGGCGATGGTGGTGTGGTGAAACTGATGACCGACA GCCAGGGCCGTTTACCCAAGCAACAACACCTGGCCATGGACCCGGTGCAGATACGCATCCTGGGCAAGGGCAGTCACAACAGCGACACGGAGTCCAACAC
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| DNA Sequence for Gene |
>A0K_RS10455
ATGAGCAGCGAACCGCTCGAGCCGAATCAGGATGTGATCATCCCTCGCTCTCGCGACAGTCTGGGACGGCCTGTCTACAAGGCGCAGTTGACCCGTACCG ACAACCAGAGCGAAAAGGTGGCACTGGTTCGGCAGACCGCTCCCCTGCCGGTGATCTTCATTCCGGGGATCATGGGAACCAACCTGCGCAACAAGGCAGA TAAAAGCGAGGTCTGGAGGCCGCCAAATGGTCTGTGGCCTCTGGGAGACTTCGCTGCCTCGTTTGGTGCGTTGTGGACTTGGGCCTGGAGGGGCCCAAAG GTCCGTCAAAAACTTCTGAGAGCCGAGAGAGTGGAAGTCGATGACCAAGGCACGATCGATGTCGGCCAGTCTGGCCTGGATGAAGACGCTGCCCGCCTGC GCGGCTGGGGCAAGGTCATGCGCAGTGCGTACAACCCCGTCATGGGATTAATGGAGAGGCGACTGGATAACATCGTCAGCCGTAGGGAACTCCAGGCATG GTGGAATGACGAAGCCCTCTCTCCTCCTGCAGATCAGGGTGAGGAGCAGGGAAAGGTTGGGCCGATCGATGAAGAGGAATTGCTCAAGGCCAGCCGATAC CAGTTCGACGTCTGGTGCGCCGGTTATAACTGGCTACAGTCCAATCGGCAGTCGGCGCTGGATGTACGCGACTACATCGAGAACACGGTGTGGCCCTTCT ACCAGAAGGAGTATGGTCTCGATCCCGAGCAAATGAGTCGTATGAAAGTCATTCTGGTCACCCACTCGATGGGAGGGCTGGTGGCGCGTGCCTTGACGCA GTTGCACGGCTATGAGCGCGTATTGGGGGTGGTGCATGGCGTGCAACCTGCGACGGGTTCCTCGACCATCTACCATCATATGCGTTGTGGCTATGAAGGT ATCGCACAGGTCGTGCTGGGACGAAATGCCGGTGAAGTGACAGCCGTTGTCGCCAACTCGGCCGGCGCGCTGGAGTTGGCCCCTAGCGCCGAATACCGGG AAGGACGTCCCTGGCTGTTTCTGTGCGACGCGCAAGGCCAGGTACTCAAGGATATTGATGGAAAGCCTCGGGCTTATCCGCAGAACCAGGATCCTTATGA AGAGATATACAAGAGCTCTACGTGGTATGGATTGGTGCCTGAACAAAATGCACAATATCTAGACTTATCAAACACTGAAAATAAAAAGAAAAATCCCAGG GTAATTTTTGAGAAGAAAATTGATGCTATTGCTGACTTTCATAATGAATTGGCTACGGCGGGCTACCACGTCGAAACCTATGTTCATTACGGTGCTGACG ATAGCCGCCATAGTTGGCGTGATTTGATCTGGAAAGGTGACCCGACCCCTCTGGAAACCCCTGGCGCCACACTCAACGACGATGAGAACGGCACTTACAA CAGTTGGTTCCGCCGGGGCTTGCCCACCATAGTGCAGGGTCCGCTGGAGGCGGGAAATCCACTGGACGCTTCCGGCAGCGGAGGTGACGAAACGGTACCG ACCGACTCCGGCCAGGCGCCTGCCCTGGCAGGTGTCAAGGCCAGCTTTCGGCATGGCAGCAAGGGCAAGGGACAGGCCAATACCAAACGGGGCTATGAGC ACCAGGAGAGTTACAACGATGCTCGTGCCCAATGGGCAGCGCTATATGGTGTGATCAAAATCACCCAGTTGGCGGATTGGCATCCTAATGACAAAGGAGG GACATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TGCATCCCCGTCGGTTGTTTGCTGTACTTGGGTTGGTGGTCTTGACCAGCATGACCAGTTGTACTTCGTTTTCTTCTTCTCGGAGCCCTTCCATGGACAA GACCGGATGGATCACTCATTGCTTTGGTCGCTTTCTGATTGATCTGCCGCCTGACGCGGTAATTAACGCCGGATACTATCTATGGGGCGACAACATCCAA CGGCTAGATGGCACACCTGCTGAGCTAGCAGCCAGGATTGCCCATCGCGAGCAAGAGTTACGGAATGGCATTCATAAAAAAACAAAGGAGAGCATGTTTG TTCGGAGGGCGGAAGACAAGGCTGGAGCCATTAGCCTGTGGTCTTGGGATTCGAATGCTAGTTTGCTTTCTTATAGGGTTGACTCATATTTTGTGGCTCA TCCCAAGGGAGAGGTTTTTCTATACTCAGGAGAAGTTACTCACGATAAAGAGAAGGAAGGGGAGGAAGCTATCAATGATATATCCCGAAGCCTTCGCTCT
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| Amino Acid Sequence |
>membrane protein
MSSEPLEPNQDVIIPRSRDSLGRPVYKAQLTRTDNQSEKVALVRQTAPLPVIFIPGIMGTNLRNKADKSEVWRPPNGLWPLGDFAASFGALWTWAWRGPK VRQKLLRAERVEVDDQGTIDVGQSGLDEDAARLRGWGKVMRSAYNPVMGLMERRLDNIVSRRELQAWWNDEALSPPADQGEEQGKVGPIDEEELLKASRY QFDVWCAGYNWLQSNRQSALDVRDYIENTVWPFYQKEYGLDPEQMSRMKVILVTHSMGGLVARALTQLHGYERVLGVVHGVQPATGSSTIYHHMRCGYEG IAQVVLGRNAGEVTAVVANSAGALELAPSAEYREGRPWLFLCDAQGQVLKDIDGKPRAYPQNQDPYEEIYKSSTWYGLVPEQNAQYLDLSNTENKKKNPR VIFEKKIDAIADFHNELATAGYHVETYVHYGADDSRHSWRDLIWKGDPTPLETPGATLNDDENGTYNSWFRRGLPTIVQGPLEAGNPLDASGSGGDETVP TDSGQAPALAGVKASFRHGSKGKGQANTKRGYEHQESYNDARAQWAALYGVIKITQLADWHPNDKGGT
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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