Strain | Pseudomonas aeruginosa PACS2 chromosome, whole genome shotgun sequence, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
CGAGGTCCGCGAGGCCAAGGCGTCGCTGCTGCCGCAACTGAACCTGGAGGCCAGCGCGCTGCGCCGGGAGATCGGCGGGCATCCGGAAAGCGACTCGGTG GTATCCCTGCGCTTCCGCATGGACACCTTCCAGGGGCTTTCCAACTTCCGCCGGCCGACCGCCGCGCAGCAGCGCCTGGAGTCGGCGAAATGGAGCGCCG ACGCGATGCAGCGCGACATCCGCCGGCAACTGCAGAACCTCTTCGACAACGGCGACACGCTGCGCTGGCGGGAACAGTCGCTGACCCAGCAGGTGACCGA GTCGGAGCAGGTCGGCGAGTTGTATCGCGAACAGTTCGAGGTTGGCCGGCGCGACGTGATCGACCTGCTCAACGTGCAGCGCGAGCGGTTCGAGGCAGAG CGGCAACTGATCAACCTGCGGATCGAACGCAAGCGCATCGAGTATCGGGCGGCCTCGCAAGTCGGCCTGTTGGGTCCGCTATTGGAGAACCGGCTGAATC
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DNA Sequence for Gene |
>A0K_RS12410
ATGGAAGCTGAGAAAACCCCGGATAACGTCGTGATCCTCAACCACGACCCCATCGTCGACCCGTTGCGCCAGGGCTTGTTGCTGCTCTGCCGGCAGCTTG GCCGACCGCTCGGCGACGCCGAACTGGTGGACGGCATGCCGCTGGAGCACGGTCGCCTGCCGTTGCACCTGGTGGCCCGCGCGTTGCGCCGCGCCGACAT CACCGCCCAGGTCACCCGCCAGCCGTTGCGCCGGATCGATCGCTACCTGCTGCCGGCCCTGCTGCTGCTCGACGACGGCCGCGCCCTGGTGCTGGTGGGC AACGACGGCGAGCATGCCGAGGTGCTGGTACCGCAGAGCGACGGCGGAAGCCAGAGGATGCCGCTGGCCGAGCTGGAAGCGCTGTACAGCGGCACGGCGA TCTTCGCCAAGTGCCGCTACCGCCCGGACGGGCGGGTCGGCGACTACGCCAGCGCCTTGCCCGAACACTGGTTCTTCGGCCCGCTCAAGCGGCTCTGGCG TTCCTACGCCGAGGTCGCCGCCGCAGCGTTGGTGGCCAACGTCCTGGCGGTCGCCTCGGCACTGTTCGCCATGCAGGTCTACGACCGCGTGGTGCCCAAC GCGGCCTTCGACACCCTGTGGATCCTCGCCAGCGGCGTGGCCCTGGCGATCGTCCTCGACGGTGTCCTGCGGATCATGCGCGGCCACCTGCTCAACGTGC TCGGCAAGCGCCTCGACCTGCAACTCTCGACCCTGCTGTTCTCCCGCGTGCTGAGCACCCGGGTCGCCGCCAAGCCGGCGTCGATGGGCGCCTTCAGTAC CCAGGTGCGGGAGTTCGAGTCGGTGCGCGAGTTCTTTACCTCGTCCAGCGCGGCGCTGATCAGCGACCTGCCGTTCGTGGCGATCTTCCTGCTGATCATC GCCGTGATCGGCGGCCATGTGGTCTGGGTGCCGCTGGTGGCCTGCGTGCTGATGATCCTGCCGGGGCTGCTGACCCAGCGCCTGCTCGGCCACCTGTCGC GGCAGAACCTGCGCGAAGGGGCGATGAAGAACGGCGTGCTGCTGGAAGCCTTCGAGCACCTGGAGACGGTCAAGGCGACCCGCGCCGAAGGCCGCTGCCT GCACCAGTGGGAAACCCTGACCGGCGAACTGGCCGGTACGGCGATGAAGACCCATACCCTGGCCTCGACCCTGAGCTACTCGGCGAGCATCGTCCAGCAG CTCTGCTACGTCGGCGTGGTGGTCTTCGGCGTCTATCGGATCAGCGAGGGCGCGATGACCGTCGGCGGCCTGGTGGCCTGCTCGATCCTCGCCTCGCGGG CCATCGCACCGCTGTCGCAGGCGGCCGGCATCCTCGGTCGCTGGCAGCACACCAAGGTGGCGATGGAAGGCCTCGACCAACTGATGAGCGCCGAGCAGGA GCGACCCCAGGGCAAGCGCTTCGTGCACAAGGAGCGCCTGCAGGGACATTACCGCCTGGAGGGCGTGCGCCTGGCCCACGGCGACAGCCCGCCGGTGGTC GACGTGCAGGCCCTGAACATCCGCGCCGGCGAGCGGGTGGCGCTGCTCGGCGGCAACGGCGCCGGCAAGTCGACCCTGCTGCGCCTGCTCAGCGGCCTGC TCGACGCGCAGGCGGGACGCCTGCTGCTGGACGACGTCAGCCTGACCCAGATCGACCCGGCCGACCGCCAGCGCGGTATCGGCTACCTGCCGCAGGACGT GGCGCTGTTCCATGGCAGCCTGCGCGACAACCTCAACCTGGAGAACGCCGCGCTGGGCGACGAGGAACTGCTGGAGACCCTCGACGGGGTCGGCCTGGGC GCTTTCGTCCGCGGCCACCCGCTGGGGCTGGACATGCCGATCCAGGGCAACGCCAGCCTGTCCGGCGGCCAGCGCCAGGCCGTCGGGCTGGCCCGGGTGC TGCTACAGGACCCTCCGATCCTGCTGCTCGACGAGCCGACCGCGGCCTTCGACCAGGGCAGCGAGAAACAGGTCATCGACTACCTGCAGCAATGGTTGGG CAAGCGCACCCTGGTCATCACCACCCACAAGAAAAGCATGCTCGCCCTGGTCGAGCGTGCGGTGGTCCTGCGCCAGGGCAGGGTGATCATGGACGGCCCG CTGGAGCAGGTGGTGCAGGGCAACCAGGTACAGGCACCGCAGGCCGCCGAAGGAGGCAACCATGGACTCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CCGCGACGCCGCCGCCCTGCGCCGGCAACTGGCCGACCCGTTGCTGGCGGCTACCCACCCGGTCTACCGGCCGCTGCTCTGGACCCTGCTCGGTTGCGTG CTGCTGTTCATCGGCTGGGCGGCCTGGGCGCAACTGGACGAGGTGACCCGCGGCGACGGTCGGGTCGTGCCGTTCAGCCGCATCCAGAAGATCCAGAGCC TGGAGGGCGGCATCCTCGACCGCCTGCTGGTGAAGGAGGGCGACCTGGTGGAAGTCGGCCAGCCGCTGGTGCGCCTCGACGAGACGCGCTTCCTCACCAA CTTCCAGGAGTCGGCGAACCAGGCCAGCGTGCTGCGCGCGGCCATTGCCCGGCTCGACGCCGAGGTGCTAGGCAAGAAGAGCATCGAGTTCCCGCCGGAC GTCGATCCCGAGGGGCCGCTGGCGCGTTCCGAACGCGAGCTGTTCAAGTCGCGCCGCGACAAACTGGTGGAGGGCACCCAGGCGATCCAGCGGCAGATCC
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Amino Acid Sequence |
>ABC transporter ATP-binding protein
MEAEKTPDNVVILNHDPIVDPLRQGLLLLCRQLGRPLGDAELVDGMPLEHGRLPLHLVARALRRADITAQVTRQPLRRIDRYLLPALLLLDDGRALVLVG NDGEHAEVLVPQSDGGSQRMPLAELEALYSGTAIFAKCRYRPDGRVGDYASALPEHWFFGPLKRLWRSYAEVAAAALVANVLAVASALFAMQVYDRVVPN AAFDTLWILASGVALAIVLDGVLRIMRGHLLNVLGKRLDLQLSTLLFSRVLSTRVAAKPASMGAFSTQVREFESVREFFTSSSAALISDLPFVAIFLLII AVIGGHVVWVPLVACVLMILPGLLTQRLLGHLSRQNLREGAMKNGVLLEAFEHLETVKATRAEGRCLHQWETLTGELAGTAMKTHTLASTLSYSASIVQQ LCYVGVVVFGVYRISEGAMTVGGLVACSILASRAIAPLSQAAGILGRWQHTKVAMEGLDQLMSAEQERPQGKRFVHKERLQGHYRLEGVRLAHGDSPPVV DVQALNIRAGERVALLGGNGAGKSTLLRLLSGLLDAQAGRLLLDDVSLTQIDPADRQRGIGYLPQDVALFHGSLRDNLNLENAALGDEELLETLDGVGLG AFVRGHPLGLDMPIQGNASLSGGQRQAVGLARVLLQDPPILLLDEPTAAFDQGSEKQVIDYLQQWLGKRTLVITTHKKSMLALVERAVVLRQGRVIMDGP LEQVVQGNQVQAPQAAEGGNHGL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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