Pseudomonas aeruginosa PACS2, A0K_RS10890 (sucC)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa PACS2 chromosome, whole genome shotgun sequence, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GAGCGCCGCCGAGCTGGTACAGCAAGGCGCGATCGGCATGGAATTCGGCACCAGCGCCGAAGACCTGGGCATGATGGTCTTCTCTCACCCGACGCTGTCC GAAGCCCTGCACGAAGCTGCCCTGGCAGTGAATGGCCATGCCATCCACATCGCCAACCGCAAGAAGCGCTGAGTGATCCGACGCCCCGGTTCACGCCAGG GGCGTCACAGCGACGCGGGACGCGTCGTCCGTCAGGCCAGGACAGGTTCCTGGCCTTGTCGGGTCCGGGTTCTGTAGAATCCACGGTTTGCCGCCTGCGT CGGGATGCCGCAGGCGGCAGACTTTCAGAAGAACCACGGCGGGTGAGCGCCGGCGACCGTTGCGAGGTGGCCGCGGGCGTATGCCGCCGGACTGTTTTTT CGCGAGCCGGGTGGTTCGCGAAACGACGGTCACAGGTGGTGGGGCGCCACGAGCGCTCCGCCGAAATGCGCAATACCTAGACGAATAACGGTAGACAAGC
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| DNA Sequence for Gene |
>A0K_RS10890
|sucC
ATGAATCTCCACGAATATCAGGGTAAGCAGCTGTTCGCTGAATACGGCCTGCCTGTATCCAAGGGCTTTGCCGTAGACACCCCCGAAGAGGCCGCAGAAG CCTGCGACAAGATCGGCGGCAGCGAGTGGGTCGTCAAAGCTCAGGTGCACGCCGGCGGCCGCGGTAAAGCGGGCGGTGTGAAGCTGGTGAAGAGCAAAGA GGACGCCAAGGCGTTCGCCCAGCAGTGGCTGGGCAAGAACCTGGTGACCTACCAGACCGACGCCAACGGCCAGCCGGTCAGCAAGATCCTGGTGGAGTCC TGCACCGACATCGACAAGGAGCTGTACCTCGGCGCCGTCGTCGATCGTTCCAGCCGCCGCATCGTGTTCATGGCTTCCACCGAAGGTGGCGTGGACATCG AGAAGGTCGCCCACGACACTCCCGAGAAGATCCTCAAGGCTACCATCGACCCGCTGGTCGGCGCGCAGCCGTACCAGGGCCGCGAGCTGGCCTTCCAGCT GGGCCTGAAGGGCGACCAGATCAAGCAGTTCACCCATATCTTCGTCGGCCTGGCGAAGCTGTTCCAGGACTACGACCTGGCCCTGCTGGAAGTGAACCCG CTGGTGATCAAGAAAGACGGCAACCTGCACTGCCTGGATGCCAAGATCAACATCGACAGCAACGCCCTGTACCGTCAGCCGAAGCTGCGCGCCATGCACG ACCCGTCCCAGGACGACGCCCGTGAAGCCCATGCGCAGAAGTGGGAGCTGAACTACGTCGCGCTGGAAGGCAACATCGGCTGCATGGTCAACGGCGCCGG CCTGGCCATGGGTACCATGGACATCGTCAACCTGCACGGCGGCAAGCCGGCCAACTTCCTCGACGTTGGCGGCGGTGCGACCAAGGAGCGCGTGACCGAA GCGTTCAAGATCATCCTGTCCGACAGCAACGTGAAGGCTGTCCTGGTGAACATCTTCGGCGGCATCGTGCGTTGCGACATGATCGCCGAAGGCATCATCG GCGCCGTCAAAGAAGTCGGCGTGAAGGTTCCGGTTGTCGTCCGCCTGGAAGGCAACAACGCTGAACTGGGTGCCAAGGTCCTGGCCGAAAGCGGCCTGAA CATCATCGCGGCAACCAGCCTGACCGACGCTGCCCAGCAAGTCGTCAAGGCCGCGGAGGGTAAGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TGAGCGTCCTGATCAACAAAGACACCAAAGTCATCTGCCAAGGCTTCACCGGTAGCCAGGGCACCTTCCACTCCGAACAGGCCATCGCCTATGGCACCAA GATGGTCGGCGGCGTGACCCCCGGCAAGGGCGGCACCACCCACCTCGGCCTGCCGGTGTTCAACACCGTCAAGGAAGCCGTGGAAGCCACCGGCGCCGAA GCCTCGGTCATCTACGTTCCGGCTCCGTTCTGCAAGGACTCGATCCTGGAAGCGGCATTCGGCGGCATCAAGCTGATCGTCTGCATCACCGAAGGCATCC CGACCCTCGACATGCTGGACGCCAAGGTCAAGTGCGACGAGCTGGGCGTACGCCTGATCGGCCCGAACTGCCCGGGCGTGATCACTCCCGGCGAGTGCAA GATCGGCATCATGCCGGGTCACATCCACCTGCCGGGCAAGGTAGGCATCGTGTCGCGTTCCGGCACCCTGACCTACGAAGCCGTGAAGCAGACCACCGAC
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| Amino Acid Sequence |
>malate--CoA ligase subunit beta
MNLHEYQGKQLFAEYGLPVSKGFAVDTPEEAAEACDKIGGSEWVVKAQVHAGGRGKAGGVKLVKSKEDAKAFAQQWLGKNLVTYQTDANGQPVSKILVES CTDIDKELYLGAVVDRSSRRIVFMASTEGGVDIEKVAHDTPEKILKATIDPLVGAQPYQGRELAFQLGLKGDQIKQFTHIFVGLAKLFQDYDLALLEVNP LVIKKDGNLHCLDAKINIDSNALYRQPKLRAMHDPSQDDAREAHAQKWELNYVALEGNIGCMVNGAGLAMGTMDIVNLHGGKPANFLDVGGGATKERVTE AFKIILSDSNVKAVLVNIFGGIVRCDMIAEGIIGAVKEVGVKVPVVVRLEGNNAELGAKVLAESGLNIIAATSLTDAAQQVVKAAEGK
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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