Pseudomonas aeruginosa PACS2, A0K_RS10425
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa PACS2 chromosome, whole genome shotgun sequence, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GCTGCCCCAGGCGTGCCAGCAGGCCGGTGATGCCCTTGCGCACCAGCGGCTCGCCGCCGGTGATACGAATGCGCCGCACGCCGAGGCCGATAAAGGCGTC GGCCACCGCGTACAGTTCCTCCAGGCTGAGGACTTGGTCGCGGGGAAGGAACTGCATGTCTTCGCTCATGCAGTAGGTGCAGCGGAAGTCGCAGCGATCC GTCACCGACAGGCGCAGGTAGGTGATGCGACGGCCGAAGGGATCGACCAGGCGGGAATCGGACATAGTGACTCGTTCTGTTCCGGGGGGCTCGCCCGGCG CTCGGTGGGTGAGTGCGAGCGGGCGACTCGATACCCCTAACGAATACTCCAAATACCGGGAAATGTATAGGGCAAATGAACCGGCGGGTCAGGATTTCCC GGGCCTCCGCCTCGCTCGCACCTTGCTTGAGGGGCGCTCCGGGCGGGTGCTACCATCCTCGGCTTCCTGCCGCCGTTGCAGCAATGAAGAACAAGGACTG
|
|
| DNA Sequence for Gene |
>A0K_RS10425
ATGACCAGCATCCGCGAGCGCAACAAGCGCCTGATCCTCCGCGCCGCCAGCGAGGAATTCGCCGACAAGGGCTTCGCGGCGACCAAGACCAGCGACATCG CCGCCCGCGCCGGCCTGCCCAAGCCCAACGTCTACTACTACTTCCAGTCCAAGGAAAACCTCTATCGCTGCGTGCTGGAAAGCATCGTCGAGCCGCTGCT GCAAGCGTCGGCGCCGTTCCGCGTGGAAGACGACCCGCTGCTCGCCCTGCCCGCCTACATCCGCTCGAAGATCCGCATCTCCCGCGAGCTGCCGCATGCC TCCAAGGTCTTCGCCAGCGAGATCATGCACGGCGCGCCGCACCTGCCGAAGGAATACCTCGACGAACTGAACGCCCAGGCCCAGCGCAACGTCACCTGCC TGCAGACCTGGATCGACCGTGGCCAGCTCGCCCCGGTGGACCCGCATCACCTGCTCTTTGCCATCTGGGCGGCGACCCAGACCTATGCCGACTTCGATTG GCAGATTTCCATCGTCACCGGCAAGGAACAGCTCAGCGACGCCGACTACGACGCTGCGGTGGAAACCATCACCCGCCTGGTCCTGAAAGGCTGCACGCCC GACGGGCAATCCGGCAAGAGCGCCGGCCGGCTTCGGCCGCTGCCGCTCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
CCCGCCGCGGCACGCTCAATCGCGTGCCGCCCCCGCCCCTGCGCCGGCCTCGCACCGAGCGGCGTGACGCGGTATTCGACCCGCGGCGGCAGCTCCGCAT ACACCTCGCCTGGACGCTATCGGCGGAGTTGCTCGAGCACGGTATCCGGGTCAACGCCCTGAGCCCGGGGCCGACCCGGACGCCAGCGCTGGACAAGGCC GCTACCGATCTCGAGGCCGCCCAGGCGCTGAGGGAGAAGATTGGCCGGGACGCCTGGGGGAGCCGCTGGAGATCGCCAGTGCCGCGCTATTCCTGACCTC GAACGAGCCCCGCTGCAGGTATGGCACGGAAATCCTGGTGGATGGCGGCGTACGCCATCTGAAGAAGGGAGCGAAGGCCCGGTCCTGGTGAACGGGCCGC AAGCTCAACCGGCGTCGGGTACCAGCCCGACCGCCAGCACGCCCTGGATCGCGCATTGCTCGTCGATATCCGAGGTATCGCCGCTGATACCGACCGCGCC
|
|
| Amino Acid Sequence |
>TetR family transcriptional regulator
MTSIRERNKRLILRAASEEFADKGFAATKTSDIAARAGLPKPNVYYYFQSKENLYRCVLESIVEPLLQASAPFRVEDDPLLALPAYIRSKIRISRELPHA SKVFASEIMHGAPHLPKEYLDELNAQAQRNVTCLQTWIDRGQLAPVDPHHLLFAIWAATQTYADFDWQISIVTGKEQLSDADYDAAVETITRLVLKGCTP DGQSGKSAGRLRPLPL
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|