Strain | Pseudomonas aeruginosa PACS2 chromosome, whole genome shotgun sequence, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
CCTCGACCTGCGACCCGACGGTGGACCGCTCGGACACATGGGCTACTTCCGCGCCGGTGCAGAGGCGCTGTGGGACGACGCCCTGCGCTGGCTGAGACGG CATCCGGAGAACGCCTGAAAGACCAGCGAGAGCGCGCCATGCACCCGTTGCCGTTGTCCCTTCGCCTGTTCGCCGTCGCATTCTGGCTGGGCGTGGTCGC CGTGGAGTTCCTTCTCGAACGCAGCCGCGCCGAAAGCCGCGACCGGGGTTTCGCCGGGAGACCGCCACCAAGGCCGACAGCTTTGCCGGGATGAACCGCT GCTCCCGGCAGATCCACCGCATCTCCCTGCTGGCCATCCCGGCCGGGCTGCTGGCCCAGGGCTGCGGCCCGTACCTGATGCGGCAACGCTGAAAAATCCG CCGACTGTCCATTTCGCGACGATGACTGGCGCTTTTGCCGGCGCAGGCCGCCCGCGCCTGCCTTACCGTTCCCCGCTCTTTCAGACACGGGAGCAGGGCA
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DNA Sequence for Gene |
>A0K_RS09120
ATGCCGCTTGCCAGTCATCTGCGTTGCGTGGCGCTGGCGCTGGGGATCTCCACCGCGCTGGGCTGCGCGAACCGCAACCAACCCGCGCCACGCGCGGAAA GCCTCGACCCTGGCCTGTCGAGGGTGGCGGGAACCCGCGGCGACGCGCTGCCCGCCCAGTGGTGGACGCTCTACCAGGACCCTGGGCTGAACCACCTGGT GGCCGCCGCGCTGCGCCACAACCGCGACCTGGCGGCGGCCGATGCCCATGCCCGCGCGCTCCTCGGCCATCTGCGCGGCGCACAGGGCGAACGCTGGCCA CGGACCGAGGTCGGCTATGGCTACCAGTATGGGCGCGACGGCGACGACCAGACCCTCGCCGAAGCCACCGACGAGGACGTACGCAGCCAGTGGAAACACA CCGCCCGCCTCGACCTGTCCTACCAGTTGGACCTGTGGGGCGAAGTCCGCGCCCGCATCGCCGCGGCGAAGGCGGATGCCGAAGCGGCGCAAGCGGCGCG CGACCTGCTCAGGGTCAGCGTGGCCAGCCAGACCACCCTCGCCTACGTCCGCGCCTGCGCCCTGGCGCGACGGGCAGAGGTACAACGCCGATCGGTCGGC CTGCTCGACGCGAGCCTGGCGCTGAGCGAACGCCAGCTCGCCGCCGGCCTTTCCAGCGAGCTGCAGCGACGCCGGCTGCTGGCCTTGCGCGAGCGGACCC GCGCCGCGCTGCCGATGCTCGAGGCGCGGCGGCGCGCGGCACTCTACGAACTGGCGCTGCTCAGCGGGCGCTCGCCGCGCCAGTTGGACGCTCCTGCCGC GACCTGCGCCGGCATACCGCAACTGCGCCGTGCCCTGCCCACCGGCGACGGCTGGAGCCTGCTGGCGCGCCGCCCGGACGTCCGCGCGGCCGAGCGCCGG CTCGCCGCCGCCGACGCCCGGCGCGCGCTGGCCGAAGCCGAGCTGTACCCGCGCATCAGCTTCGCCGTCGGCGCCGAAACCTCCGCAGCGACCCTCGCCG GCCTCGGCGGCAGCGGCGCGCTGGCCTACGCGGCCGGCCCGCTGCTGAGCTGGCGCTTCCCCAACCGGGAAAGCGCGCGAGGCCGCCTGGACAGCGCAGC GGCAGAGCGCGACGCCGCCCTGGCGCGCTTCGACGGAGCGGTGCTCGGCGCCCTGCGCGAGGTCGAGCGTGCCCTGGCGCTGTATGCCGGCGAGCGCCAG CGGCGTGCCGACCTCCAGCGTGCCCTCGACGAGCAGCGCCACGCCTACCGGTTGGCGCGCAGCAACTATCGCGCCGGCGCCCTCGATGCCCTCGAGCTGC TCGACAGCCAACGCAGTCTGGTCGCCGACCGGGCGCGCCTGGTCGACGCCGAGATGCGCGTCGCCGAGCGCCAGGTCGAACTGTTCCGGGCTCTCGGCGG CGGCTGGCAAGCCGCTTCCAGCCCCTCCCACCAGGAAAACGGACAATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
ACCAGGCAATCAGGGACCCCATCGAACACACCACTGGCGAAACCATGCCAGCAGCCACGCGCCGGCGCCGAACCTGGCTGCTGGGCGGCCTCGCCGGCGC CATCGCGCTCGCCGCCCTGCTGGCCTGGTGGTGGAGCAGCGGACGCTTCCTGGAGGGCACCGACGATGCCTATGTACGCGCCGACTGGGTGGCGGTCAGC GCGCAGGTCTCCGGCTACGTCGCCGAGGTGCTGGTGGCCGACGACGCCGACGTCCAGGCCGGCGACCTGCTGCTGCGCCTGGACCCGCGCGACTTCCGCC AGCGCCTGCGCGCCGCCGAGGCCCGCGAAGCGGCGGCGCAGGCGGCGCTGGAAGCCCAGCGCGCGAAGCTGGAGACCCTCGATCGGCAACTGCTGGAGCA GGCGCAGACGATCAGCCGCGCCCGCGCCGATGGCGAAGCGGCGCGAGCCGAATGGCGCCGCGCCGAGACCGACTGGCGACGCTACCGGCAATTGGCCGAC
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Amino Acid Sequence |
>multidrug transporter
MPLASHLRCVALALGISTALGCANRNQPAPRAESLDPGLSRVAGTRGDALPAQWWTLYQDPGLNHLVAAALRHNRDLAAADAHARALLGHLRGAQGERWP RTEVGYGYQYGRDGDDQTLAEATDEDVRSQWKHTARLDLSYQLDLWGEVRARIAAAKADAEAAQAARDLLRVSVASQTTLAYVRACALARRAEVQRRSVG LLDASLALSERQLAAGLSSELQRRRLLALRERTRAALPMLEARRRAALYELALLSGRSPRQLDAPAATCAGIPQLRRALPTGDGWSLLARRPDVRAAERR LAAADARRALAEAELYPRISFAVGAETSAATLAGLGGSGALAYAAGPLLSWRFPNRESARGRLDSAAAERDAALARFDGAVLGALREVERALALYAGERQ RRADLQRALDEQRHAYRLARSNYRAGALDALELLDSQRSLVADRARLVDAEMRVAERQVELFRALGGGWQAASSPSHQENGQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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