Strain | Pseudomonas aeruginosa PACS2 chromosome, whole genome shotgun sequence, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
CTTCGCCCATGTCGGCGCGCAACGCGGGATGTTTTCCTATACCGGACTGAGCCCGCAGCAGGTCGCTCGGCTGCGCGACGAGCACGCCGTTTACCTGGTC TCCAGCGGCCGGGCCAACGTCGCCGGTCTCGACGCGCGCCGCCTCGACCGCCTGGCGCAAGCCATCGCCCAGGTCTGCGCGGACTGAACCCTCACGGTTA CCCTGAGCCGGCTGTGATGGCCGGCTTTTTTTCGCCCCAGCGAATGCCGCGCACTCCCGCCGAGGCGGCGGATAACCGCGTTGCGGTTATTCGCCCTACC GCACCACGACCTTGTGGGCGTAGGGCGAATAACGCCACAGGCGTTATCCGCCGAACCTCTCTGAACCGGGCCAACCATAAGTCAGCACTTTCAAAGCCCT ACGTGCTTTTCCTACAAAAGAGCATAAAATGCTCAATTATGGGCACCAGTTCACACTGCGCCCCACGGCCCCCACTTTCTCGTCTTAGTGAGCAACGCAC
|
|
DNA Sequence for Gene |
>A0K_RS07230
|pbpG
GTGAGAAACCGTCTCCTGTCACTGGTCACCCTGTTCCTGTCCCTCAGCGTTGCCACCGCGGTATCCGCCTCCCCGCCGCCCAAGGCCGGGCTGCCGCTGC AACAGGAGCTGGCGTCGGGCAGCGCGCTGGTTACCGACCAGAACACCGGCAAGGTACTCTACTCGCGCAACCCCGACCTGGTGGTGCCGATCGCCTCAAT CACCAAGCTGATGACCGCCATGGTCGTGCTCGACTCGAAACTGCCGCTGGACGAGGTACTGCCGATCGCCATCAGCGAGACCAGCGAAATGCGCGGGGTG TTTTCCCGGGTGCGGGTCGGCAGCCAGATCAGCCGCCGGGACATGCTCCTGCTCGCCCTGATGTCCTCGGAGAACCGCGCCGCCGCCAGCCTCGCGCAGA ACTATCCGGGCGGCAAGAACGCCTTCGTCAAGGCGATGAACGCCAAGGCCCACGCCCTGGGAATGAAGAACACCCGCTACGTCGAGCCGACCGGGCTGTC GCTGCACAACGTCTCCACCGCTCGCGACCTCACCCGCCTGCTGGTGGCCAGCCGGCAATATCCGCTGCTCAGTCAGTGGAGCACCACTCCGGAGAAGACC GTGGCCTTCCGCCACCCCAACTACACCCTGGGCTTCCGCAACACCAACCACCTGATCAACAACAAGACCTGGAACATCCAGTTGACCAAAACCGGCTTCA CCAACGAGGCAGGCCACTGCCTGGTGATGCGCACCACGATCAACCGCAGCCCGGTCAATCTGGTGGTGCTGGACGCCTTCGGCAAGTACACCCACTTCGC CGACGCCACGCGCCTGCGACGCTGGCTGGAAACCGGCCAGGTCACTGCGATCCCGGCCGCGGCCAAGGCCTATCGCCTGCAACGCGACCGCGAGCGCGGC CTCGGCCAGCCGGTGGCCCAGGCCGTACGCTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
DNA Sequence Downstream of Gene |
TCCGTCGCGAAGACCGGCCGGCTCAGAAATCCACCTTGCCGCGCCCGGCCTTCACCGCGCCGCGCTTGGCCTTGCCGTCCAGCCGGCGCTTCTGCGAGCC GCGCGTAGGCTTGGTCGGGCGCCGCGCCTTCTGCACCTTGGCCACGCTGCGGATCAACTCCGCCAGGCGCTCCAGGGCATCCTCGCGGTTCTGCTCCTGG GTCCGGTACTGCTGGGCCTTGATCACCACCACGCCGTCGCCGCTGATGCGCTGGTCGTTCAGTGCCAGCAGACGCTCCTTGTAGAACGGCGGCAACGACG AGGCCTGGATGTCGAAGCGCAGGTGCACCGCGCTGGAGACCTTGTTGACGTTCTGCCCGCCGGCGCCCTGGGCGCGAATGGCATTCAGCTCGATCTCATG GTCGGGCAGGTGGACGGCATTGGAGATGATCAGCATGGGGCGGCACGGTGGACCAACGGGCTGCCAGCATAACCCCTTTGCCGAGCGGAAAAGCAGGCCA
|
|
Amino Acid Sequence |
>D-alanyl-D-alanine endopeptidase
MRNRLLSLVTLFLSLSVATAVSASPPPKAGLPLQQELASGSALVTDQNTGKVLYSRNPDLVVPIASITKLMTAMVVLDSKLPLDEVLPIAISETSEMRGV FSRVRVGSQISRRDMLLLALMSSENRAAASLAQNYPGGKNAFVKAMNAKAHALGMKNTRYVEPTGLSLHNVSTARDLTRLLVASRQYPLLSQWSTTPEKT VAFRHPNYTLGFRNTNHLINNKTWNIQLTKTGFTNEAGHCLVMRTTINRSPVNLVVLDAFGKYTHFADATRLRRWLETGQVTAIPAAAKAYRLQRDRERG LGQPVAQAVR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|