Pseudomonas aeruginosa PACS2, A0K_RS05760
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa PACS2 chromosome, whole genome shotgun sequence, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CCGAACAGGAGAAGCTGAAAGCCCTGCAGGTCGAACTGGGCAAGACCAACGAGCAACTCAAGGCCCTCGGCGGCGATGTCGCGGCGCTGAAGAAGCAGGG CAACCCGAGCCAGACGATCAAGGGTATCCAGGATGACCTGCTGGTATTGCGCAGCCAGCTCGACAACCGCCCGGCCCAGGGCGGCAATACCGCCGAGTTC GACGCCTTCCGCACCCAGGTGATGCGCAACATCAACACCCTCCAGGCCCAGGTGCAGAACCTGCAGCAGCAGCTCAATACCCGCTGACCCCTTGCCGCCA GCCGCCCGTCGCACCGGGCGCTGGCGGCGACAGTTCGCCGCGCCCGGCGAAAATCCCCGCTTCCATTGCTCTGGATCAGCGAATCCGCTGCTCCTCCACT CCGATACTGCGTCCTTAAGCGAGCCTTAAGTGAGAGTCGTTTAGATTCTCGGTCACCGGCCAGGGAGGCCATTGGTCCCTTCCTCTGCCTGGAATCCGCC
|
|
| DNA Sequence for Gene |
>A0K_RS05760
ATGAGCGCACTGCAACCGTCCCGTTCCTACCGCATCACCGGTTATTCCCCCGCCATCAGCAACGGCTATCGCCAACGCCTGTTCTCCATGGGGCTTCTGC CCGGCGCGGCGCTGCGCGTGGTGCGCATCGCCCCGCTGGGCGACCCGATCCAGGTCGAGACCCGCCAGACCAGCCTGGCGCTGCGGCGCAAGGACCTCGC CCTGCTGACCCTCGTCCCGCTCGACTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
CCCCGCCCGGAATCCCCATGACCGCATTGACCCTCGGCCTGATCGGCAATCCCAACTCCGGCAAGACCACCCTGTTCAACCAGCTCACCGGCTCGCGCCA GCGGGTCGGCAACTGGGCCGGCGTCACCGTGGAGCGCAAGGAGGGTGCGTTCCATACCGTCCGTCACGCGGTACGCCTGGTCGACCTGCCCGGCACCTAT TCGTTGACCAGCGTTTCCGCCCAGGCCTCGCTGGACGAGCAGATCGCCTGCCGCTACATCGCCAGCGGCGAAGTGGACGTGCTGGTCAACGTGGTGGATG CGGCGAACCTGGAGCGCAACCTGTACCTCACGGTGCAACTGCGGGAGATGGGCATCCCCTGCATCGTCGCGCTGAACATGCTCGACATCGCCCGTAGCCA GCGCATCCGCATCGATATCGACGGTCTGGCGCGGCGTCTCGGCTGCCCGGTGGTGCCGCTGGTATCCACCCGCGCCGATGGCATCGACGAACTGAAGGCG
|
|
| Amino Acid Sequence |
>iron transporter
MSALQPSRSYRITGYSPAISNGYRQRLFSMGLLPGAALRVVRIAPLGDPIQVETRQTSLALRRKDLALLTLVPLD
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|