Pseudomonas aeruginosa PACS2, A0K_RS05515

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0009245 lipid A biosynthetic process
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: PseudoCAP:PA4406
 ECO:0000249
sequence similarity evidence used in automatic assertion		 9068651
Molecular Function GO:0008759 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: PseudoCAP:PA4406
 ECO:0000249
sequence similarity evidence used in automatic assertion		 9068651
Biological Process GO:0009245 lipid A biosynthetic process
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:3.30.230.20
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0008759 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:G3DSA:3.30.230.20
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Cell wall / LPS / capsule Other PACS2 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
PANTHER PTHR33694 UDP-3-O-ACYL-N-ACETYLGLUCOSAMINE DEACETYLASE 1, MITOCHONDRIAL-RELATED IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase 3 284 1.4E-90
Hamap MF_00388 UDP-3-O-acyl-N-acetylglucosamine deacetylase [lpxC]. IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase 2 279 47.07692
Gene3D G3DSA:3.30.1700.10 lpxc deacetylase, domain 2 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal 128 303 2.6E-73
FunFam G3DSA:3.30.1700.10:FF:000001 UDP-3-O-acyl-N-acetylglucosamine deacetylase - - 128 303 5.9E-96
FunFam G3DSA:3.30.230.20:FF:000001 UDP-3-O-acyl-N-acetylglucosamine deacetylase - - 1 127 2.8E-70
SUPERFAMILY SSF54211 Ribosomal protein S5 domain 2-like IPR020568 Ribosomal protein uS5 domain 2-type superfamily 134 277 1.82E-52
SUPERFAMILY SSF54211 Ribosomal protein S5 domain 2-like IPR020568 Ribosomal protein uS5 domain 2-type superfamily 3 124 6.98E-43
Gene3D G3DSA:3.30.230.20 lpxc deacetylase, domain 1 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal 1 127 4.6E-52
NCBIfam TIGR00325 JCVI: UDP-3-O-acyl-N-acetylglucosamine deacetylase IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase 2 298 2.6E-121
Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase 4 275 2.1E-108

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.