Strain | Pseudomonas aeruginosa PACS2 chromosome, whole genome shotgun sequence, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
TCCAGACTTGGGAAAGTTCTGGTCGGTCTGAGCGAAACCGGCCTTGGTCAGCCGTTCCTCATGCAGGAGGTGGATATGAGCGCTTTCGACCCCGCTACCG CCCTGGAAACCCTGGCGACCGAGTACGCGGCACGCGCCGCGGCGATCCGCCGGGACCTGGCGCGCAGCCATTCGCCGGACTTTGCCGAGCAGGCGGTGCA GCGCCAGAACGACGAAGTGCTCGAAGGCCTGCTCGCCGAGGCGGAGGCGGGGATGCGCCAGGTCGGCCTGGCCCGCCTGCGCCTGGCGGAAGGTCGCTAC GGCCAGTGCGAGCGCTGTGGCGAGGCTATCGAACCGGCGCGCCTGGCCGCCCTGCCTGCGGCGGAATACTGCCTGCGCTGCGCCGACCTGGTACATCGGT GAGATAGCGCCATCCGCGCCTTGTCAGTGGCGCGAGGCTGGGGGGAGAATGCGGGCGACGACACCCCGCGGCGATCTGCCGCCCGATGCAAGGATTCCCG
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DNA Sequence for Gene |
>A0K_RS04060
ATGCCCGATTCCGTCGCTGCCGGCCTGCGCCTGGCGCCAGAAGAACTGACCCGCCCGTTCGCTCCCGAGCAATTCGCCTTCGACACCACCGATGACCTGG AGCCCTTCCGCGGCGTGCTGGGCCAGGAGCGTGCGGTCGAGGCGCTGCAGTTCGGTGTGGCGATGCCGCGTCCGGGTTACAACGTATTCGTCATGGGCGA GCCGGGGACCGGACGCTTCTCCTTCGTCAAACGCTATCTGCAAGCCGAGGGCAAGCGCGTCGCCACGCCCTCCGACTGGGTCTACCTGAACAATTTCGAC GAGCCGCGCGAACCTCGGGTGATCGAGCTGCCGCCGGGCAGCGCAACCGAATTCAGCGCCGACATCGACCGTCTGATCGACAACCTGATGTCGACCTTCC CGGCGGTCTTCGAGCATCCGGCCTACCAGCAGAAGAAGAACGCCGTCGACCGCGCTTTCAACCAGCGCTACGACCGCGCCCTGGACTCGGTGGAGCGGCG CGCCCTGGAGAAGGACGTGGCGCTGTACCGCGACAGCGCCAACGTCGCCTTCACCCCGATGAAGGACGGCAAGGCCCTCGATGAGGCCGAATTCGCCCAG TTGCCCGAAGCCGAGCGCGAGCGTTTCCACAAGGATATCGCCGCCCTCGAGGAGTACCTCAACGAGGAACTGGCGAGCCTGCCGCAGTGGAAGCGCGAGT CGAGCAACCAGTTGCGCGAGCTCAACGAGGAAACCATCACCCTGGCCCTGCAGCCCCTGCTGGCGCCTCTGGTGGAGAAGTACAACAACAACCCGGGCGT CTGCGCCTACCTGCAGGCGATGCAACTGAACCTGCTGAAGACCGTGGTCGACCAACTGGTCGACGACAGCCGCACCGACGCCCAGCGCAAGCAAGGGCTG ATCGAGCAGTACGCGCCGAACCAGGCCATCGTCCACCACGCGACCAGCGGCGCGCCGGTGGTGTTCGAGTCGCACCCGACCTACGACAACCTGTTCGGCC GCATCGAGTACAGCTCCGACCAGGGGGCGCTCTACACCAGCTACCGGCAGTTGCGTCCGGGGGCGCTGCACCGGGCCAACGGCGGCTTCCTGATCCTGGA AGCGGAAAAGATGCTGGGCGAGCCGTTCGTCTGGGACGCGCTCAAGCGTGCCCTGCAGTCGCGCCAGTTGAAGATGGAGTCGCCGCTGGCCGAACTCGGC CGCCTGGCTGCGGTCTCCCTGACCCCCCAGGTGATCCCGCTGCAACTGAAGGTGATCATCATCGGCTCGCGGCAGATCTACTACACCCTGCAGGACCTCG ACCCGGACTTCCAGGAGATGTTCCGGGTACTGGTGGACTTCGACGAGGACATCCCGCTGGGCGAGGACAGCCTCGAACAGTTCGCCCAGTTGCTCAAGAC GCGCACCTCGGAAGAGGGCATGGCGCCCCTCAGCGGCGCGGCGGTGGCGCGACTGGCGACCTACAGCGCGCGCCTGGCCGAGCACCAGGGGCGGCTTTCA GCACGGATCGGCGACCTGTTCCAGTTGGTCAGCGAAGCCGATTTCATCCGTCAGCTGGCGAACGAGGAGGTGATCCAGCTCGGCCACATCGAGCGTGCCC TCAAGGCCAAGCAGACCCGCACCGGACGAGTGTCGGCGCGGATCCTCGACGACATGCTGGCGGGGATCATCCTGATCGACACCGCTGGCGCCGCGGTCGG CAAGTGCAACGGACTGACCGTGCTGGAGGTGGGCGACTCGGTGTTCGGCGTGCCGGCGCGGATTTCCGCGACCGTCTATCCGGGCAGCAGCGGCATCGTC GACATCGAGCGCGAGGTCAACCTCGGCCAGCCGATCCACTCCAAGGGCGTGATGATCCTCACCGGCTACCTGGGTAGCCGCTACGCCCAGGAGTTCCCCC TGGAAATCTCCGCCAGCATCGCCCTGGAACAATCCTACGGCTACGTGGACGGCGACAGCGCCTCGCTGGGCGAGGTCTGCACGCTGATCTCGGCACTGTC GCGGACGCCCTTGAAGCAGTGCTTCGCCATTACCGGCTCGATCAACCAGTTCGGCGAGGTTCAGGCGGTCGGCGGCGTCAACGAGAAGATCGAGGGCTTC TTCCGCCTCTGCGAAGCGCGCGGTCTGACCGGCGAACAGGGTGTGATCATCCCGCGCGCCAACGTCACTACCCTGATGCTCGACGAGCGCGTGTTGCAGG CGGTGCGCGCCGGGCAGTTCCACGTCTACGCGGTGCGCGAGGTGGACGAGGCGCTGGCGCTGCTGGTGGGCAAGCCGGTCGGTGCCCAGGACGAGAAGGG ACGCTTCCCGAAAGGCAGCGTGAACGATCTGGTCGTGGCGCGCTTGCAGGAGATATCCGAACTCGGCATGGAAGAGGACGACAAGGAAAAGGACAAACCG GCGGAGAAAGAGACCGTCGTGGCGAAGGACAAGGCCGCGGCGAAGAAGGACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GCCTGGCGCGCTGTCGGAACCTGTCGAGGGCGGGGCTGGAAAGCCCCGCCCTCGTGCGTTTCAGCCCTGTGGACAAGTTCCCGCCGGCGCTATGCGGAAC CTGGCGGCAGGTGTAGGCTCAAAACTGGGAACCCCCGTGAGGATGCCGCCATGCCGCGTAACCTCTGCCTCATCCGCCCTTGTCTGGGGCTGACCACGCG AATCGAATGCGTGGTCAGGCCGCTGGCCGGAGAGAACGGACTCTGGACCCTGCTTTGCGCCGCCGGCATGTCCGGCTCCCAGCCTTCGGCGATCAAGGCC CAGGGCCCCTTCCACGGACCGCTGGTGGCCGAAGGGGTGTTGCAGGCGATTGCCGACTGCCTGGCCCAGCAAGGCTATATCGAAGCCGTCGACCCGCCGA TCTGGCGCCTGCACCTGCAGGGCGAACTGCGCCGACTCAATGGCGAACGACGGCCGCATGTCGGCGACTACCTGTTTCGCCCGGAATCCTGAGCGGCGCC
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Amino Acid Sequence |
>ATP-dependent protease
MPDSVAAGLRLAPEELTRPFAPEQFAFDTTDDLEPFRGVLGQERAVEALQFGVAMPRPGYNVFVMGEPGTGRFSFVKRYLQAEGKRVATPSDWVYLNNFD EPREPRVIELPPGSATEFSADIDRLIDNLMSTFPAVFEHPAYQQKKNAVDRAFNQRYDRALDSVERRALEKDVALYRDSANVAFTPMKDGKALDEAEFAQ LPEAERERFHKDIAALEEYLNEELASLPQWKRESSNQLRELNEETITLALQPLLAPLVEKYNNNPGVCAYLQAMQLNLLKTVVDQLVDDSRTDAQRKQGL IEQYAPNQAIVHHATSGAPVVFESHPTYDNLFGRIEYSSDQGALYTSYRQLRPGALHRANGGFLILEAEKMLGEPFVWDALKRALQSRQLKMESPLAELG RLAAVSLTPQVIPLQLKVIIIGSRQIYYTLQDLDPDFQEMFRVLVDFDEDIPLGEDSLEQFAQLLKTRTSEEGMAPLSGAAVARLATYSARLAEHQGRLS ARIGDLFQLVSEADFIRQLANEEVIQLGHIERALKAKQTRTGRVSARILDDMLAGIILIDTAGAAVGKCNGLTVLEVGDSVFGVPARISATVYPGSSGIV DIEREVNLGQPIHSKGVMILTGYLGSRYAQEFPLEISASIALEQSYGYVDGDSASLGEVCTLISALSRTPLKQCFAITGSINQFGEVQAVGGVNEKIEGF FRLCEARGLTGEQGVIIPRANVTTLMLDERVLQAVRAGQFHVYAVREVDEALALLVGKPVGAQDEKGRFPKGSVNDLVVARLQEISELGMEEDDKEKDKP AEKETVVAKDKAAAKKD
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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