Strain | Pseudomonas aeruginosa PACS2 chromosome, whole genome shotgun sequence, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
CTGCTGGAGTGGCTCGGCTCGCCGCTGGTGTATCGGGAAGAGCCTGGCGTGCGCGAGGAACTGCTCTGGCTGGGCAGCGCCTTTCACTCCGTACCAGGCA GTCGCCATCACTACCTGTCGATGGCACGCAAGAACTACCGGGGCTACCTGAAGGGCGACAGCGTCCGGCTGAAGAAATACCTCTACGTCCTGCGTCCGTT GTTCGCGGTGCGTTGGCTGGATGCAGGCCTGGGCTTGCCGCCGGTGGCGTTCGAGAGGCTAGTGGAAGCCACGCTGGACGATCCGTCGCTGCGCGAAGAA CTGGATGCCCTGCTGAGCCTCAAGCGTCAGCGCGACGAATCGGCCTACGGCCCTCCGCGCCTGGCGCTGCAACGCTTCATCGAAGCGGAGTTGCTCCAGG CCGAACGAGGGGCCACCCAACCAACCGGCGCGCGCCAGGACAGCCGACTGCTGGATCGCTACCTCCACGACAAGATATGGCAATACACAAGGGAAACCTC
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DNA Sequence for Gene |
>A0K_RS04005
ATGAGAAAGGACCTCATCGAACTCGACGGCAGCGAAGGCGGCGGGCAGATCCTGCGTAGCGCCCTGAGCCTGTCGATGACCAGCGGCCAGCCGCTGCGCA TCCGCAACATCCGTGGCCGGCGCAGCCGTCCGGGGCTGCTGCGGCAGCACCTCACCGCGGTGCGCGCGGCGGCGGAAATCTGCGCGGCCGAGGTCGAGGG TGCCGAGCTCGGCTCACGCGAGCTGGCGTTCCGGCCCGGTGCGATCCGCGCCGGCGACTACGCCTTCGCCATCGGCTCCGCCGGCAGTTGCTCGCTGGTA CTGCAAACCCTGCTGCCGGCGCTGCTCGCGGCCAACGGCGAAAGCCGGGTGAGGATCAGCGGCGGCACCCACAATCCACTGGCGCCGCCGGCGGACTTTC TCCGCGACAGCTGGCTGCCGCTGTTGCAGCGGATGGGCGCGGAAGTCGACCTGGAACTGCTGCGCCACGGCTTCGTACCCGCCGGCGGTGGCGAGCTGCT GGCGCGGGTACGCCCGGCACGCTGGCGGCCGCTGCAACTGGAGCATCCCGGCGCGGCGCTGCGGCGCCAGGCGCGGGCGCTGCTCGCCGGGATTCCCGGG CACGTCGGCGAGCGTGAGCTGGAGAGGGTCCGCCAGCGCCTCGGTTGGAGCGACGAAGAACGCCAGCTGGAGTTCCTCGCGGAGGACCAGGGGCCGGGCA ACGCCCTGCTGCTGCGGATCGACTGCGAGCACATCTGCGCGACCTTCTGCGCCTTCGGCCAGGCCGGCGTCAGCGCCGAACGGGTGGCGGAACAGGTCGC GACGCAAGCCATCGGCTGGATGGAAAGCGGCTGCGCGGCGGACGAGCACCTCGCCGACCAATTGCTGCTGCCCATGGCCCTGGCCGGCGCCGGCAGCTTC ACCACGCCGCGGCTGAGCGCCCATCTGCAAAGCAACCGCCGGGTTATCGAACGCTTCCTGCCGGTGAGGATCGGCGACCAGGCGCTGGACGGCGGCGGTC ATCGCATCGTCATCACATCGGCTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CGAATTCCTCACCAATGCCGACCTAGACTCGCGCCGGACCTGCCAGCGGGCCCGGCGCGAATCTCCGGGAGCCCCATCCCGGCGGTCGAGGAGTCCCGGC CATGTCTTCTTCGCGTCTCGGCGTGCTTGTCCTCGCCCTGATCCTGCTCACCGCCACCCTGCTCGGCGGCTGCGAAAGCACCCACCAGTACCTGCTCGCC AAGGGCTACCCGCCCGCCTATGCCGACGGTTTCGACGATGGCTGCGGTAGCGGCCGCCAGGCGGCCGGCTCGATCAGCGGCGAATTCCGCAAGGACGTCC CCCGCTACCTGCGTGAGGCGATCTACGCCAGCGGCTGGGGCGACGGCTTCGAGCAATGCCGGTCGATGGCGCGGAGCGAAGAGCGGCGGCGTTTCGAGGA GCGCCAGTGGGACGACCGCGACGACGATTGGCAGCGCGACCGCGACCGCGCGTTGGCCCGGGCCTTGCGCGAGCGCTGAAGCACGCTGCGACAACCATCC
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Amino Acid Sequence |
>RNA 3'-terminal-phosphate cyclase
MRKDLIELDGSEGGGQILRSALSLSMTSGQPLRIRNIRGRRSRPGLLRQHLTAVRAAAEICAAEVEGAELGSRELAFRPGAIRAGDYAFAIGSAGSCSLV LQTLLPALLAANGESRVRISGGTHNPLAPPADFLRDSWLPLLQRMGAEVDLELLRHGFVPAGGGELLARVRPARWRPLQLEHPGAALRRQARALLAGIPG HVGERELERVRQRLGWSDEERQLEFLAEDQGPGNALLLRIDCEHICATFCAFGQAGVSAERVAEQVATQAIGWMESGCAADEHLADQLLLPMALAGAGSF TTPRLSAHLQSNRRVIERFLPVRIGDQALDGGGHRIVITSA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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