Pseudomonas aeruginosa DSM 50071, B5D65_RS28940 (paeM2)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa DSM 50071, whole genome shotgun sequence. [Details] | |
| DNA Sequence Upstream of Gene |
GCACTGCAAAGCGGCCTGAAGTAGAGCTAACTCCCCGTGTCGTTCAAGCTTTTGGCTTCCTGGCGATTTTCGCCAGGGGCTTGACACAGGCCATTTTTTG TTTGTGTGGCTCGCCAGCGTGACCGCCACCTCCGCTCATCGACCGCCTTGTTGGCCTGACCAGGATCTCGCTAGGGCGATGAGCAGGACGCCGGCACTGG CCGCCAGGCCGACTTGGTAGGCCTGTTCGCTCGACCAGCAATGTCTATCGTACCCAGGGGTAGTCCATCTCCATGAAAAGACCATATAAATCACACAATT CTTGAAAACAGGGCTATTAGAATGCTTGAGGATCAAGGGTCATCTGGTGCGTAGACTGTATATTGCCGTTCCTTGGGGGTGTATTTAAGTCTTTTGCCAT TTTGAGATTGCCTAACCTACTCATAGCTAGTTATCTAGATCTCGTGGGCCTTCCCCCACAGTTCAGCCATTGGTTAAAAGCAAAAATCTAGGAGCTGTAT
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| DNA Sequence for Gene |
>B5D65_RS28940
|paeM2
ATGGCAATGGATCTTGGTACCACAACAATATATGCTAGTCAGGGCAGTTTTGGCACCTACAACTATGGGAATAACGGCGCAAACTGGCCTGCACCCCATC CGGCACAAATTGGTTATATCTCTAAAGGCCAGCGGAACGTCGCTTATGTAAATGGCGACTGGGAGAAACCTCTGCTTTCTCTGTGGACTCAGTGGGCGAA CTGGGGTACGACTCTTTATGGATACCCAAGCCTTCCTCAGCCCAATTTCGAGTTTATATGGGACATCTTTGACCTACCTCAGGCAGACTACAATCAGTAT TCTCTAGGTGACGATAGGATCACTGCAATGAATCGCGCGCAGAATCACAACTATCGTGCTCCTGTAGGTGTCGATGAACCCAACTGGGATCGCCCAAAAA TCGATACGTTCAATGGTGGGGTCTACACGCCCGCGGCAGCTTTTGCTCACTACCTGACGGGCAAAGGTAAGAAAATGAACTTCCCTATTGAACGTTTGAA TATTAAACCTAATGTAAAGGCTATGCCTCAGTTCATTGGGATTCTGACGAGCAGTCCAATGGGGCAAACCACTGTGGATTTCAATGTGCCATACGCTACT GCTAAGGATAGTTGGGTGGCTGGAAACACGGTTGGAGAGATTACGCTCCGAGTGACAGGCACCCTTGTTAAGTCCACCTCAGGCCAATGGAGCTTCCGTG GAGAGATCCGTGCATATGATGATGTATATGACTTTAATCCTTCAAATCATCGAACCGAAACGGCTGAAGGGATGACTCGCTTAGGGCGTGAAGTGGGTCA GAAATTTAAAGACACTACTCCCTATCCCATTGGAATTCCGGGTACTATCCCTGTTAATATTTCTGGTTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
ATTTAACAGAAGAGGCACCCCTCGTGGGTGCTTCTTACCATAAGAGGATGGTTTCATGAGAAAAGACATTCTTCTGATTTTTACATTTCTGCTGGTTATC CTGTGTGCGGCAATATCCTTTTCTGGATTCTCGGAAGGTAACGTCAACCCCGATGACACCACGGGTGTTCCCGTTGAATCTATGTTTGTTGGTTTTTTAA CTTTGTTTGGTAGTATTTCTATGCTTGCGTTGGTTGTTGGCGTGTTGATTGGTAAACTTGTATTGAGGTTTGATGCGTTATTTTCTAGATATATATTTGC CGGCTTGTCTGCTGTGCTTACTATGCCAGCACTATTCTTGACGGCGGTAATTCTCTTCTTTTCTGTACTGTCGGTCTCTGAAAGCTCTTACGCTTGGCTT TCGGTCGCCTCGTGTACTGCCCATCTTCTATTACTGATTATTTTCTATAGGTCCAAGCTCTCAAGTGTCTATCTAGTAAAGTAGACGTAAAGCTGCGATA
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| Amino Acid Sequence |
>PaeM2
MAMDLGTTTIYASQGSFGTYNYGNNGANWPAPHPAQIGYISKGQRNVAYVNGDWEKPLLSLWTQWANWGTTLYGYPSLPQPNFEFIWDIFDLPQADYNQY SLGDDRITAMNRAQNHNYRAPVGVDEPNWDRPKIDTFNGGVYTPAAAFAHYLTGKGKKMNFPIERLNIKPNVKAMPQFIGILTSSPMGQTTVDFNVPYAT AKDSWVAGNTVGEITLRVTGTLVKSTSGQWSFRGEIRAYDDVYDFNPSNHRTETAEGMTRLGREVGQKFKDTTPYPIGIPGTIPVNISG
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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