Pseudomonas putida KT2440, PP_5725 (tke8)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas putida KT2440 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
ACATGGCTTTCGATGCCTATATCCAAATCGCGGAAATTACTGGCGAAGCGCTGGACCAGCAATACGCCAACTGGATCGAAATCGTCGGTTATAAATTCGG TGTCAGCCAAAGCACCTCAGCCACCGCAAGCTCTGCGGGTGGCGCATCTTCAGGGCGCACCACCCTCACCAATTTCACCTTCACCAAATACCTGGACAGT GCCAGCTGCAAGCTTCTTGAAGCCAGTTGTGCCGGCCAGCACCTAAAGGAAGTGAAGCTGGTGGTATGCCGTGCTGGTACCGACAAGCTCAAGTACTACG AAGTCGTTCTCGAAGAAGTGATCATCGCCGACTACGCCCAGAGCGCCAGTTCCGGCGTCCCGATGGAAGTCGTACAGCTCAACTACGGGCGGATCAATAC CACCTACACGCGGCAGAAGCGCCTCGACGGCAGCGCGGGCGGCAACGTCACGGGCGGTTGGGACCGTATCAACAACAAGAAGTATGCGTGAGGTGCGACC
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| DNA Sequence for Gene |
>PP_5725
|tke8
ATGTCCGAGGCACGCAGCTTCATTAATTCGCACACGCAGTCATATGATTCGCTGAAGGCCGATACGCCCATGACGGCCAATCAGCGCGGCAAGTTTGATG TGTTGAATGCGCATATCGTCAATAGTGTGGTGGTAGGTGGTGAACTGGTTATTGTAGGTGATCCAACCACGCCCTCCTGTACAAGTCATGAAGAATTTTT AATGTCTCAGGCAGAAGGATCCATCATCTACTTGAAGTCAATGGTGCTGGGGTGGATGATTTTTTATTGGATAACTACGAAATGTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
ATAGTTTTCTTGCTCATGCGTCGATGGGGGCAGGCGCAGTAAGTGACGGCTGGAGCAGGCATCTCGATGCAATCAAGGAAACACTCGGGCAGATTGAGCA GCTTCATCGAGATTACTTGGGGGGCGGCACGATCAAAGCGCGTGATGAATTTTATGCCAAGCGGATGGTTTTGTTCATTAGGTTGGAGGAGCAGCTGGAT AGGCTAGCGGCATACGGTTCGGGCTTGCGTAAAAAGGGGAAAGCAAAGAGAACGCTAGGGATTTCCACGAAGAGTTATCTGCACGCTGGTGAAATTGTTG GGTATGCGGAAAAGATCGCTGGAGTTTCCAAGGCTGCTAATCTCATAAAGAACGGCACTTATATCGGTATCGGGCTAGATGTGGCTGCAACAGGATTGAG TATCCATCAAGCGTGCACCCTTGGGCGAGAAGATGAGTGTGCGCAAGCCAGGTATGTCGAAGGGGGCGCTTTGATAGGCAGCATTGGCGGCAGCATCGCA
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| Amino Acid Sequence |
>Tke8
MSEARSFINSHTQSYDSLKADTPMTANQRGKFDVLNAHIVNSVVVGGELVIVGDPTTPSCTSHEEFLMSQAEGSIIYLKSMVLGWMIFYWITTKC
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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