Strain | Pseudomonas putida KT2440 chromosome, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
GCCCCGTCTCATGGATCAATACGCGACGCACCGTGGGTGCCTCCAGCTCCTGCGCTGACCACTGTCGCTGCGGCGTGAATCCCGGCGTACCCGCCGCCTG ATCGAAACACGCCAGGCGCTCGATATTGGACACGATCCGTGGGCAGTCCGGCGATGCACGGGTCAAGGCAGGCATTAACAAGAAAAGTAATGAAAGTCCC ACGCCACCTGTATAACGAATAATCATCTCACCTTAACTCTCCCACTCAATCGTACACATGCCCCTGCGTTAACCCAGCCCTCGCAACAGCGGAAAAGAGG CTAGTACATAAACTCAATTCTATTCAATAATTTATTTTGTTACATATTTGAACTCGACGCTCAACGATTATCCAGCGCATGGTTTTTACGCAACGAATAA CTCAAATCCCAAGAATCATGCTTATTAAACGTTTAACGCGCAAGCTTACTTGTAGGAAGCGTCCTACATATAAAACCCACACTAAAAAAGATATATAACC
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DNA Sequence for Gene |
>PP_4074
|tssB2
ATGACTAAACGCTCCGATTCCGTTGCACCCAAAGAACGCATCAACATCAAATATGTGCCCGCCACCGGTGACGAGCAGGCCGAGGTAGAGCTGCCGCACA AGATGATGGTGCTGGGCGACTTCGGCCTCGATGACAGCCGCTCCCTCGAAGACCGCCAGGTCATGCGCATCGATAAACACACCTTCAACAACGTGTTGAA TGACGCCGATGTGAGCCTGGCCATGTCGGTGCCCTCCGCGCTTGACGCAACTCCGAATGCAGAGCTGGCAGTCAACCTGCAATTCAAGTCCATCCAGGAC TTCGGCCCAGATCGCATCGCACGCCAGGTGCCCGAGCTGAACAAGCTGCTGCAGTTGCGTGAAGCGCTGGTTGCCCTGAAAGGCCCGCTGGGCAACGTGC CCACCTTCCGCAAACAGCTGCAGCAGCTTCTGAACGACGCGCATGCCCGCAAGCAACTCGCGCAAGAACTCGACCTGGTGCTTGAAGCGCCAAAAGCAGA CTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GACAACGGAGCGTCCCCATGCCAAAGCCAAGCACAACTGTCACTGTTGAAACACAGGCCGAAACACTGAGCAATGCCACCTTGCTCGACCAGATCATGGC AGAGACCAAGTTGGTTCCCACACAAGAGGGTTACCAAGTGGCCAGGCAGGGTGTATCCGCCTTCATTGCCGAAATTCTAAAAAACAATGACCCAGATCAA TTGATCAACAAACACCGCGTCGACCAGATGATTGCCGAGCTGGATCGGGTCCTCAGCAAGCAGATGGATGCCATTCTGCATGAACCCGCGTTCCAGCAAC TTGAATCCGCGTGGCGAAGCCTCAAACTTCTGGTCGACCGTACGGACTTTCGCGAGAACATCAAGCTCGAAGTCTTGCACGTCAGCAAGGAAGACCTGCT CGATGACTTCGAGAACGCCGCCGACATTACCTGCAGTGGTATTTATAAACACGTCTATACCGCCGGCTACGGCCAGTTCGGTGGCGAGCCGGTCGCGGCA
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Amino Acid Sequence |
>TssB2
MTKRSDSVAPKERINIKYVPATGDEQAEVELPHKMMVLGDFGLDDSRSLEDRQVMRIDKHTFNNVLNDADVSLAMSVPSALDATPNAELAVNLQFKSIQD FGPDRIARQVPELNKLLQLREALVALKGPLGNVPTFRKQLQQLLNDAHARKQLAQELDLVLEAPKAD
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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