Pseudomonas putida KT2440, PP_4049 (vgrG5)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas putida KT2440 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GAGAGGGTGAGGGGCGAACGGCATTGCCCCATGCATGACAGTTGCGCACTGTTTTGGTGCGTATTCGTACCGCCAAATGGGGCTGGCTGGTGCATGTCCG GATGTGCCCAATCCTATATCGGTGCGACACCCTGCACAGGGGCGAGTATCCAAGCGGTTCAAAAAGTTTGGCTCGAATAATTATCTGAGTTACAGGGTCG GCAGTCAGGCAAACGGATCGTATGATAAAAAGTTGTAAGTTCATGCTGTAGGAAATTGCCTGCGGAATCTCCATTTATATTAAACCCATCGTTCCTGTCT TGTCATGGTGATACGGTTTAAGTTGCTCTTCAATCCACTGCCTCATCCTGATCGCCGTCATGGGGTGAAGCCCGCAATGCCAAGCATCTAGCGGGCTTGA ACCTTGGTGGCGGGCCAATTTAGTTCGATATTCTCATCTTGAAGAAAGCCAGGGTGTGGTTGTTTTTCGCCGGCAAACATGATGGCGGGTAGAGCAACTC
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| DNA Sequence for Gene |
>PP_4049
|vgrG5
ATGAAACAGTCCGACTTTCGCTTCAGTTTTCAGGCGCTCGCCGGGCGCACGGAATTTGAAGTGGTTTCATTCAAGCTGGATGAAACCCTCAACCAGCCAT TTGTGCTGAACCTGGAACTTGTGAGCTACGAAAGTGATATCGATTTCGGCCACGTCCTCGACAAGCCTGCGCTATTCACCCTTTACAGCGCAGACCGGCC ACTGCGTCATGTGCATGGCCTAGTCAGTGCCTTCAGCCAGGGCGAAACCGGCTTTTGTCGCACGCGCTACCACGCCGTGGTCGAGCCGCAGCTGGCCCGC GCGCGGTTGCGTTCGAACTGGCGGATCTTTCAGCAGAAAACCGTGCCGCAGATTCTTGAACTCATGTTCAAGCGTCAGGGCATCACCCGCTTTGAGCTGA AAAGCAGCGCGCAGCACCAAGTGCGGGAGTTTTGTGTTCAGGCGGGTGAAACCGACCTCGACTTCATCCATCGCCTTGCCGCTGAAGAGGGGTTCGTCTA CCGCTTCGAACACTGCGCCCGGCAGCACACGCTGATCGTTACCGACCGCTTGCTGTCGTTTGGGCTGCTCAGCCGGGGCGCGCTTAAGGCAGAGGACGAC GAGGCGCTTTGGCTGGATGAGGATGATGTCGGCCCCGACAAGGTGCTGTACCACGCCAGCAGTGGTGGCGACCAGGCCCGCGCATGCCTGCGGCGCTTGC GCTATTGCGAGCAGGTACGTACTGCGCGGCAAGTGCAGCGCGACTACACCTTCACCAACCCGGCCTACCGGCAGGAGCACAAGGCCCAGACCAGTGGCGT CACGCACCAGTCACTGGACTACGAGCGCTTTGATTACCCGGGGCGCTACAAGCGCGATGCGGTGGGCAAGCCCTTCACTGAAACACGGCTGACGGCGCTG CGCCACGACGCATGCCTGGCTGAAGTGCAGGGCGACGATGTGCGCCTGCAGACAGGCCTGAGCTTCACCCTCGTCGGCCACCCGCGGGAAGACCTCAATG TTCACTGGCGCGTGATCAGCCTGTGTCACGAAGGTACCCAGCTCACCAGCCTGCAGGAAGAAGCGGCTGGCGCTGAACAAGGCACCCGCTACGTGAACGA TGCGTTGCTGGTGCAGGGCATGGCCGAGTGGCGCCCGGCCCCCATGGCCAAGCCGCGCATTGATGGCCCACACATGGCCACCGTGGTCGGCCCGCCTGGG GAGGAGATCTATTGCGACGAATGGGGGCGGGTCAAGGTCAGCTTCCCGTGGGACCGGGAGAGCAAGAACAACGAGTTCAGCTCCTGCTGGGTATGGGTGT CGCAAGGCTGGGCCGGTGGCAGCTGGGGTTCGATGGCCATCCCGCGTATCGGCCAGGATGTGATTGTCCAGTACGTCAATGGCGACCCCGACCAGCCAAT GATCACCGGGCGCACCTACTGCGGTGACCAGCTGCCGCCGTACGACCTTCCGGATCACAAGACCCGCATGACCATCAAGAGCCAGACCCATAAAGGCGAT GGCTTCAACGAGTTGCGCTTCGAAGACGAGCTGGGGCGGCAGGAAGTGTTCATACATGCCGAGCGCGACCAGAACAATGTTGTGAAACACAACGAAACCA CGCTCATTGGCAATGACCGTAGCGAACGCGTCGAGCATGACGAAGTGGTGGACATCGGCGGCAACCGCAGCGTCAAGGTTGGCGCCAGCAAGCGCGAAAC GGTCGCCCTTGGCAAAGTTGAAAGCATTGGCCTGGGCAAGTCGCTGGCCGTTGGCGGTGCGCTAAGTGTCATGGTCGGCCTTGAGGCCACCGAGCAGGTC GCGCTGGACAAGCGCGTGCAGGTCGGCGGGCAACTGCGGGTCGACGCCGATGAGGATGTGTCGATCACCAGTCATCACGGCCATGTGCATATCGACAGCC GAACGTCGCTGACCCTGAGCTGCGGCGGGGCCTTTATCAAGCTGAGCGATGGCCGCATCGAAATCGGTTGCCCCGAACCACTGCTGTTACACGCCATCGC CCAGGTCAAGGCGCCTGCACGTTACGGAGTACCGCCTGCACCTGAGCAGGACGAAATCGAGTTTCGCCTGGTGCATGCCGACGGTACGCCGATTGCGGGC ACGGCCTACGTGGCAACGTTGTCCGATGGCACCCAGCGCCAGGGCGTGGTCGACCAGAACGGCTATGCCCGCCTGGCTGGCGTCACTCCCGGTTGCAGCG CCCAAGTGCGCTACGAAGTTGGCCCGGGCCCGCTGCAGCTGACGACTGCAACCGAGCTGGATGCTGCCTTGCAGGCATTGCTTGCCGGCTGCACCTCAGC AGGTGGCCAGCCATGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GTTCGACAGCTGACTGGCTGGACCAAGCGGTGGAAAAAGTGGCCGACGGCTTTGGCTGGCTGCGTGACCTGGTGCTTGGCGAGTTTGCCGAGGAGCGGCC ACTGAGCGTGGTCATCGCCGACATGCTGCTGTCGTTGGTGCCGGGGGTGGTGATTGTGCTCAGTGCCCGTGACCTGGCTGCGGTGTGCCTGCGCCTGGGC AAGCGCTACGCGGCGGACGGCAGCCAGGCAACGCCGCAGCCGCCGGAATGGCAAGAGTGGGTGTTGCTGGTGGCCTGCCTGATGACCCTGATCGCGCCGA TCATCGGCGCTGTGGTGGGGGCGGTGGGCACTCCCGTGGGCTCGATGGCAGGCGCACTGGTTGGGCAGGAAGCAGCAGCGTTCTTGCGTGGTTTGTGCTT GCTGTTGATACGTGAAAGTCAGGTCATCCTGCAGACAGTGGTTGCGTTTCTCGGCAAGTTCACCCGCGGCAGCGTGGAGTTCTGGCTGCACCAGGTCAGG
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| Amino Acid Sequence |
>VgrG5
MKQSDFRFSFQALAGRTEFEVVSFKLDETLNQPFVLNLELVSYESDIDFGHVLDKPALFTLYSADRPLRHVHGLVSAFSQGETGFCRTRYHAVVEPQLAR ARLRSNWRIFQQKTVPQILELMFKRQGITRFELKSSAQHQVREFCVQAGETDLDFIHRLAAEEGFVYRFEHCARQHTLIVTDRLLSFGLLSRGALKAEDD EALWLDEDDVGPDKVLYHASSGGDQARACLRRLRYCEQVRTARQVQRDYTFTNPAYRQEHKAQTSGVTHQSLDYERFDYPGRYKRDAVGKPFTETRLTAL RHDACLAEVQGDDVRLQTGLSFTLVGHPREDLNVHWRVISLCHEGTQLTSLQEEAAGAEQGTRYVNDALLVQGMAEWRPAPMAKPRIDGPHMATVVGPPG EEIYCDEWGRVKVSFPWDRESKNNEFSSCWVWVSQGWAGGSWGSMAIPRIGQDVIVQYVNGDPDQPMITGRTYCGDQLPPYDLPDHKTRMTIKSQTHKGD GFNELRFEDELGRQEVFIHAERDQNNVVKHNETTLIGNDRSERVEHDEVVDIGGNRSVKVGASKRETVALGKVESIGLGKSLAVGGALSVMVGLEATEQV ALDKRVQVGGQLRVDADEDVSITSHHGHVHIDSRTSLTLSCGGAFIKLSDGRIEIGCPEPLLLHAIAQVKAPARYGVPPAPEQDEIEFRLVHADGTPIAG TAYVATLSDGTQRQGVVDQNGYARLAGVTPGCSAQVRYEVGPGPLQLTTATELDAALQALLAGCTSAGGQP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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