Pseudomonas putida KT2440, PP_3665 (cahR)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas putida KT2440 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GGCGCTGGGCCTGATACCAGGCGGCATTGCCCGGCTGACGCCCGGCCCCCAGCAGCCCGCGCCTGGCGCGGAACCAGTCGACCACGATGGTGATCTCCAG GCCTGGCCGCTCGGCCTTGGCCTGGTACAAGGCATCCAGGACTTCCTGGCCAGCCTCATCCTCCTGCAGGTACAACGCGACGATAACGATGCGCCGAGTC GCCGCACGGATGCGCTCGAACAGGCAGGCGCGGTAAGCCCTGGCATCGGGCAGCACCTGGATCGCTTCGGGGGCCATGGCGTAGCCTGGCAAGCCCGCCA GCATGGTTTCGGGGTTCACTGACGCTCACCTTCTCTGTGCAATCACTGTCGGCCCTGCCTGCCGGCGGGGCCATTCCTGGCCGCTGCATCCGGGGTGTAT GATCGACCCGGCAACGACCCATAACAACAAGAACCACGCGAGGCTCTGCTTTCTCACTGCCCCTGACCAACCAGGCCTCAGCTTGCACAGGAACAGCGCA
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| DNA Sequence for Gene |
>PP_3665
|cahR
ATGGTCCACCCCGCTTCTGCAAACCTATCGCCGTCTAGTGTAAAGAATTGTTCGGCAAAGACCTTTGGCTTCCTGATTTTGCCCAATTTCACCACCATCG GCCTTGCGTCGGCGGTGGAGACCCTGCGCATGGCCAACCTGGCCGCGCGCAAGCCACTGTATCGCAGTGTGCTGATCGCCGCAGACGACGCGCCGGTGGT GGCCAGCAACGGCATGCGCGTACTGCCCGACTACAACATCACCAACGCCCCCGCGCTGGATGCCTTGCTGGTGGTCGGCGCCAACCCGATCGACCGAAGC CGTAGCAACCGCCCATTGATCGACTGGTTGCGCCAACTGGCCCGCCAGCGCTTGCCACTGGGCGGTATCTGCACCGGTAGCTACCTGCTGGCCAAGGCCG AATTGCTCAAAGGCTACCGCTGCACCATCCACTGGGAAGACCTGCCGACGTTGCAGGCGCACTTCCCCGGTATCGTGATCTCCAGCCAGCTGTTCGAACT GGACCGCGACCGTTACACCTGCTCAGGCGGCGTGGCGGCCATGGACATGATGTTGCAACTGGTGGCCCGCGACACGGGCGGCCAGGACATCGCGGCCAAG GCCGCCGAGCTGTTGCTGTGCGACCGCGTACGCGGTGAGCGTGAGCGCCAGCGTGTGCCGCTGCGCACCCTGCTCGGCAGCGCTCAGCCCAAACTGAGCC AGGTGGTGGCGATCATGGAGGCCAATCTGGAGGAGCCGCTGGGGCTGGAGGAACTGGCCAGCCTCAACGACGTGACCGTGCGCCAATTGGAGCGGCTGTT CCACAAGTACCTGCAGCGCACGCCCAGCCAGTATTACCTGGAGCTGCGGCTGTCGCGGGCGCGGGAGTTACTGCTGCGCAGCGACGTGCAAGTGCGTGAG GTAGCGCTGGCCTGTGGCTTCAGTTCGCCTGCGCATTTTTCCAAGAGTTATAGCCGGTTCTTCGGGCTGTCGCCTTTAGGGGAGCGGCGGCAGGCCTCTC TCCACTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
GTTGGGTCAGGTATTGGCATTGCTGGCCTCTTCGCGGGCAAGCCCGCGCCTACACGCACATCGGTGGTCCGCCACAGGCCGTTGTAGGCGCGTGAGAAGA AGCCAGTGCAGGTCAACTAATCTTCAAGGGCCGCGTGCGCCGTCTCCCGACACATCAGCATGGCCACCAGCGCCACCAGTGCTGCCGCCAGCAAGTATCC TGCCGGGGCCAGCTTGCTGCCCGTCACCTGAATCAGCCAGGTGGCAATGAACGGCGCAGTCCCGCCAAACAGCGCATTGGCCACATTGAAGCTCAGGGCA AACCCGCTGAAGCGCACCCGGGTCGGAAAGATTTCGGCCAGCAGGCACGGCAAGGTCCCGTCGTTCATCGCCAGCATCGCACCGAAAAGGATCTGGATGG CCAGAATCACCAGCAGCGGCTGGCCGTCCAGCAGGCGAAACAACGGCACGGTCAACCCCAGGAACAACAGCGAGGCCACCACCAGCATGGTCTTGCGACC
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| Amino Acid Sequence |
>creatine amidohydrolase regulator, CahR
MVHPASANLSPSSVKNCSAKTFGFLILPNFTTIGLASAVETLRMANLAARKPLYRSVLIAADDAPVVASNGMRVLPDYNITNAPALDALLVVGANPIDRS RSNRPLIDWLRQLARQRLPLGGICTGSYLLAKAELLKGYRCTIHWEDLPTLQAHFPGIVISSQLFELDRDRYTCSGGVAAMDMMLQLVARDTGGQDIAAK AAELLLCDRVRGERERQRVPLRTLLGSAQPKLSQVVAIMEANLEEPLGLEELASLNDVTVRQLERLFHKYLQRTPSQYYLELRLSRARELLLRSDVQVRE VALACGFSSPAHFSKSYSRFFGLSPLGERRQASLH
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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