Pseudomonas putida KT2440, PP_2679 (pedH)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas putida KT2440 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GCGCCCTGACCACGCCCAACAGCCCGGGGCTGGACGTGTGGCTCAAGGACCTGGATACCCTGCAGGCACTGCCCTGGAAACAGCTTGTACCCGGGCATGG CCCGTTGGCCAGTGATGCGCAGCCGTTCGTGCAGATGCGTGACTACCTGGGCTGGCTCGATGGCCTGATGCGTGATGGCGCGGCGCGCGGTGACGACATG GCTGAGATGATCCGCAGCCCCATTCCCGAACGTTTTGCCGGGATCAGCCTGACGCGTTATGAGCTGATCCGCAGTGTCAGCCACCTGTACCCGCGTTACG AGCGCCAGCAGTTGCAGCGCTTGCCATGACATTTTTTGTGCCTGTCAGCCCCCGTGCCGCCCACCCATCACTCAGGCCGCTACCAAGGAACTAGAAAACT CCGCACTGCGAGCAATTGTTGGCAATCGGGTCGGGACCAAGAATTCCCGACACACCGGGAAATTTTCCCGGGCACAACAAAAAAACCAAAGGTAGCCGTC
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| DNA Sequence for Gene |
>PP_2679
|pedH
ATGACCCGATCCCCACGTCGCCCCTTGTTCGCCGTGAGCCTGGTGCTCAGCGCCATGCTGCTTGCCGGCGCGGCTCACGCCGCTGTCAGCAATGAAGAAA TCCTCCAGGACCCGAAGAACCCGCAGCAGATCGTGACCAATGGCCTGGGCGTGCAGGGCCAGCGCTACAGCCCGCTGGACCTGCTCAATGTCAATAACGT CAAGGAGCTGCGCCCGGTCTGGGCGTTCTCCTTCGGCGGGGAGAAGCAGCGCGGCCAGCAGGCCCAGCCGCTGATCAAGGACGGGGTGATGTACCTGACC GGCTCCTACTCGCGGGTGTTCGCCGTGGATGCCCGCACCGGCAAGAAACTGTGGCAATACGATGCACGTCTGCCGGATGACATCCGCCCCTGCTGCGACG TAATCAACCGCGGCGTCGCGCTGTACGGCAACCTGGTGTTCTTCGGCACGCTGGACGCCAAGCTGGTGGCCCTGAACAAGGACACCGGCAAGGTGGTCTG GAGCAAGAAGGTCGCCGACCACAAAGAAGGCTACTCCATCAGCGCCGCGCCGATGATCGTCAATGGCAAGCTGATCACAGGCGTTGCCGGCGGCGAGTTC GGCGTGGTGGGCAAGATCCAGGCGTACAACCCGGAGAACGGCGAACTGCTGTGGATGCGCCCCACCGTGGAAGGGCACATGGGCTATGTGTACAAGGATG GCAAGGCGATCGAGAACGGTATTTCCGGCGGTGAGGCGGGCAAGACCTGGCCTGGCGACCTGTGGAAGACCGGCGGCGCCGCGCCGTGGCTGGGGGGTTA CTACGACCCTGAAACCAACCTGATCCTGTTTGGTACCGGTAACCCGGCGCCGTGGAACTCGCACCTGCGCCCCGGTGACAACCTGTACTCCTCCTCACGC CTGGCACTGAACCCGGACGACGGCACCATCAAGTGGCACTTCCAGAGCACGCCGCATGACGGCTGGGACTTCGACGGCGTCAACGAGCTGATCTCGTTCA ACTACAAGGACGGCGGCAAGGAGGTCAAGGCTGCCGCCACGGCAGACCGCAACGGTTTCTTCTACGTGCTCGACCGCACCAACGGCAAGTTCATCCGCGG CTTCCCCTTCGTGGACAAGATCACCTGGGCCACTGGCCTGGACAAGGACGGCCGGCCGATCTACAACGACGCCAGCCGCCCGGGCGCACCCGGCAGCGAG GCCAAGGGCAGCTCGGTGTTCGTCGCGCCGGCCTTCCTCGGCGCCAAGAACTGGATGCCGATGGCCTACAACAAGGACACAGGGCTGTTCTACGTGCCGT CCAACGAGTGGGGCATGGACATCTGGAACGAAGGCATCGCCTATAAGAAAGGTGCGGCGTTCCTCGGTGCCGGCTTCACCATCAAGCCGCTCAATGAAGA CTACATCGGCGTGCTGCGCGCCATCGACCCGGTCAGCGGCAAGGAAGTGTGGCGCCACAAGAACTATGCGCCGCTGTGGGGCGGTGTGCTGACCACCAAG GGCAACCTGGTGTTCACGGGCACGCCAGAGGGCTTCCTGCAGGCATTCAACGCCAAGACCGGCGACAAGGTCTGGGAATTCCAGACCGGCTCGGGCGTGC TCGGCTCGCCCGTCACCTGGGAAATGGACGGCGAGCAATACGTTTCGGTAGTCTCCGGCTGGGGCGGCGCGGTGCCGCTGTGGGGCGGCGAAGTGGCCAA ACGGGTCAAGGACTTCAACCAGGGCGGCATGCTCTGGACCTTCAAGTTGCCCAAGCAGTTGCAGCAAACGGCAAGCGTCAAGCCATAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CGCCTGCCTACTGCCGCTTGCTGCCGCTGATCGGTGGCAAGCGGCCCTACTACCAAATGACGAGAGCCCCGCTGCCAACGATGCATTCGCCCGGCACGCG GGGCTTCTTACCATCGGTGCATCGCCTGTCGTGGGACAGGCACCGACCCGCAGAGGCTCAGCATGATCTACGCACAACCCGGAACTCCAGGCGCCGTCGT ATCCTTCAAACCCCGTTATGGCAACTTCATCGGTGGCGAGTTCGTGCAGCCGTTGGCTGGCCAGTACTTCATCAACAGCTCGCCGGTCAATGGCCAGCCG ATTGCCGAATTCCCGCGCTCCACGGCCCAGGACGTCGAGCGCGCCCTGGACGCCGCGCATGCCGCCGCCGAAGCCTGGGGCAAGACCTCGGTGCAAGACC GTGCGCGGGTACTGCTGAAAATTGCCGACCGCATCGAACAGAACCTGGAAGTGCTGGCGGTTACCGAAAGCTGGGACAACGGCAAGGCCATACGCGAAAC
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| Amino Acid Sequence |
>PedH
MTRSPRRPLFAVSLVLSAMLLAGAAHAAVSNEEILQDPKNPQQIVTNGLGVQGQRYSPLDLLNVNNVKELRPVWAFSFGGEKQRGQQAQPLIKDGVMYLT GSYSRVFAVDARTGKKLWQYDARLPDDIRPCCDVINRGVALYGNLVFFGTLDAKLVALNKDTGKVVWSKKVADHKEGYSISAAPMIVNGKLITGVAGGEF GVVGKIQAYNPENGELLWMRPTVEGHMGYVYKDGKAIENGISGGEAGKTWPGDLWKTGGAAPWLGGYYDPETNLILFGTGNPAPWNSHLRPGDNLYSSSR LALNPDDGTIKWHFQSTPHDGWDFDGVNELISFNYKDGGKEVKAAATADRNGFFYVLDRTNGKFIRGFPFVDKITWATGLDKDGRPIYNDASRPGAPGSE AKGSSVFVAPAFLGAKNWMPMAYNKDTGLFYVPSNEWGMDIWNEGIAYKKGAAFLGAGFTIKPLNEDYIGVLRAIDPVSGKEVWRHKNYAPLWGGVLTTK GNLVFTGTPEGFLQAFNAKTGDKVWEFQTGSGVLGSPVTWEMDGEQYVSVVSGWGGAVPLWGGEVAKRVKDFNQGGMLWTFKLPKQLQQTASVKP
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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