Pseudomonas putida KT2440, PP_2674 (pedE)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas putida KT2440 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
AGCGCAGTTCTGGTTGTAGGCCGAGGCGCCGATTTCCACGGCCTTGTCGTGCTCGGGCGAGCTGCGGTACGGGTTGACCGCGGCCCAGCCGTCGCCGTCC AGGCTCACGCCAGTGTCCTTGATCGGGGTCAGGCCCTTGGTCTCCACTGCCTGGGGCACCACGTTGCCATGGGCCCAGGCTGTACCGGTCAGCACGGCTG CGGCCAGCAACCCAGCAGCAAGCAACACATTGCATTTTGTTGTCATTGTTATGCCCTCACCATTGCACACAAAGCCTCAACCACAGAGGCCGTGCCGCCA TCTTAGGAACAGCCCGCGGGCGGCCGAATGCTGCTTTGGTGGCCGGGCCTTAATCCCTTGGTAGTAGGGCTTGTGGCGAAGGGCCAATTGAGGTGCCGCG CGGGAATTATTCCCGGCAAGGGCGGGACTTTTTCCGTATCCCGCGATGGCCGCTGCGCCCCACCCTGTGCAGGCCAAAACCTCCACTGGGAACTGCAACC
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| DNA Sequence for Gene |
>PP_2674
|pedE
ATGACAATAAGATCGCTACCCGCCCTTTCCCCGCTGGCCCTGAGCGTGCGCGTCCTGCTGATGGCCGGTAGCCTGGCCCTGGGCAATGTGGCAACAGCGG CCAGCACACCCGCTGCACCTGCCGGCAAGAACGTCACCTGGGAAGACATCGCCAATGACCACCTGACCACCCAGGACGTGCTGCAGTACGGCATGGGCAC CAATGCCCAGCGCTGGAGCCCGCTGGCCCAGGTCAATGACAAGAACGTGTTCAAGCTGACCCCGGCCTGGTCCTACTCCTTCGGCGACGAGAAGCAGCGC GGCCAGGAATCCCAGGCCATCGTCAGCGATGGCGTGGTCTACGTCACCGGTTCGTACTCACGGGTATTCGCCCTCGATGCCAAGACCGGCAAACGCCTGT GGACCTACAACCACCGCCTGCCCGACAACATTCGTCCCTGCTGCGACGTGGTCAACCGCGGGGCGGCGATCTACGGCGACAAGATCTACTTTGGCACCCT CGATGCGCGTGTCATCGCCCTCGACAAGCGCACCGGCAAAGTGGTGTGGAACAAGAAGTTCGGCGACCACAGCGCCGGCTACACCATGACCGGTGCGCCA GTGCTGATCAAGGACAAGACCAGCGGCAAGGTGCTGCTGATCCACGGCAGCTCCGGCGATGAATTCGGCGTGGTCGGCCAGCTGTTCGCGCGCGACCCGG ACACCGGTGAAGAAGTGTGGATGCGGCCCTTCGTGGAGGGCCACATGGGCCGCCTGAACGGCAAGGACAGCACCCCGACCGGTGACGTCAAGGCGCCGTC CTGGCCAGACGACCCTACCACCGAAACCGGCAAGGTCGAAGCCTGGAGCCACGGCGGCGGTGCCCCTTGGCAAAGCGCGAGCTTCGACCCCGAAACCAAC ACCATCATTGTCGGCGCTGGCAACCCCGGCCCTTGGAATACCTGGGCGCGCACGTCGAAGGACGGCAACCCGCATGACTTCGACAGCCTGTACACCTCCG GCCAGGTCGGCGTCGACCCGAGCACCGGCGAGGTCAAGTGGTTCTACCAGCACACCCCCAACGATGCCTGGGACTTCTCCGGCAACAACGAGCTGGTGCT GTTCGACTACAAGGACAAGAACGGCAACGTGGTCAAGGCCACCGCCCACGCCGACCGCAACGGTTTCTTCTATGTGGTTGACCGCAACAACGGCAAGCTG CAAAACGCTTTCCCCTTCGTCGACAACATCACCTGGGCCAGCCATATCGACCTGAAGACCGGGCGCCCGGTGGAAAACCCCGGCCAACGCCCGGCCAAGC CGCTGCCGGGTGAAACCAAGGGCAAGCCGGTGGAAGTCTCGCCACCGTTCCTGGGCGGCAAGAACTGGAACCCCATGGCCTACAGCCAGGACACCGGGCT GTTCTACATCCCCGGCAACCAGTGGAAAGAGGAATACTGGACCGAGGAAGTGAACTACAAGAAGGGCTCGGCTTATCTGGGCATGGGCTTCCGTATCAAG CGCATGTACGACGACCACGTCGGCACGTTGCGCGCCATGGACCCGACCACCGGCAAGCTGGTGTGGGAACACAAGGAACACCTGCCGTTATGGGCCGGTG TGTTGGCGACCAAGGGCAACCTGGTGTTCACCGGCACGGGCGACGGCTTCTTCAAGGCCTTCGACGCCAAGACGGGCAAAGAGCTGTGGAAGTTCCAGAC CGGCAGCGGCATCGTCTCGCCGCCCATCACCTGGGAGCAGGACGGCGAGCAGTACATCGGCGTGACCGTGGGCTACGGCGGTGCAGTACCGCTGTGGGGC GGCGACATGGCCGAGCTGACCAAACCGGTGGCTCAGGGTGGTTCGTTCTGGGTGTTCAAGATCCCGAGCTGGGACAACAAGACTGCACAACGTTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CCTGCAGCGGGGAGCGGCCTGCGCCCCTCCCCGTTTCTGCCCTTCTCCCGTCCAGAGGCTTTTGCCATGAATTACCTGCCCTTGACCTTGCTGCTGGCGC TATCCCCTGCCCTGGCAGTGAACGCCGACGACGCCGGCACCGATACCCCCTTGACCATCAACGGCTGCGTGATTGCCGAAGCCAGCCAGTGCCCGGGGGC CAACCTGCGCGGCGCCAACCTGGCCAACCAGGACCTGCGCAAGATGAACCTGGCCGGTGCCGACCTGCGCGATGCCGACCTGCGTCATGCCCAGCTGGAC CTCGCAAATCTGGAAAAAGCCCGCCTGCAAGGAGCCAACCTGACCCGCGCCAGCCTGCAACAGAGCAATCTGCGCCTGGCTGACCTGAGCAACAGCAGGC TGGTGGCCATTCAAGGCTGGGGCTTGTTCGCCCAGGGCGCACAGTTTGAAAAGGCGGACCTGCGCGCAGCCTATCTGCAGTTCGCCAGGCTGTCCGGGGC
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| Amino Acid Sequence |
>PedE
MTIRSLPALSPLALSVRVLLMAGSLALGNVATAASTPAAPAGKNVTWEDIANDHLTTQDVLQYGMGTNAQRWSPLAQVNDKNVFKLTPAWSYSFGDEKQR GQESQAIVSDGVVYVTGSYSRVFALDAKTGKRLWTYNHRLPDNIRPCCDVVNRGAAIYGDKIYFGTLDARVIALDKRTGKVVWNKKFGDHSAGYTMTGAP VLIKDKTSGKVLLIHGSSGDEFGVVGQLFARDPDTGEEVWMRPFVEGHMGRLNGKDSTPTGDVKAPSWPDDPTTETGKVEAWSHGGGAPWQSASFDPETN TIIVGAGNPGPWNTWARTSKDGNPHDFDSLYTSGQVGVDPSTGEVKWFYQHTPNDAWDFSGNNELVLFDYKDKNGNVVKATAHADRNGFFYVVDRNNGKL QNAFPFVDNITWASHIDLKTGRPVENPGQRPAKPLPGETKGKPVEVSPPFLGGKNWNPMAYSQDTGLFYIPGNQWKEEYWTEEVNYKKGSAYLGMGFRIK RMYDDHVGTLRAMDPTTGKLVWEHKEHLPLWAGVLATKGNLVFTGTGDGFFKAFDAKTGKELWKFQTGSGIVSPPITWEQDGEQYIGVTVGYGGAVPLWG GDMAELTKPVAQGGSFWVFKIPSWDNKTAQR
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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