Pseudomonas putida KT2440, PP_2625 (vasI3)
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas putida KT2440 chromosome, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CAGGCTCACATTGGCGTCGTTCAACACGCTGTTGAATGTATGTTTATCGATGCGCATGACCTGACGGTCCTCAAGCGCACGGCTGTCATCCAGGCCGAAG TCGCCCAGCACCAGCATCTTGTGCGGCAGCTCCACCTCAGCCTGCTCATCGCTGGTAGCGGGGACATACTTGATATTGACGCGTTCTTTCGGCGCAACGG ATCCCGTATTTTTAGACATCGGTACGCAACTCCCTGTTGGGCTGTAGGATGTTCAGGTGCTAGTTGTGTTTATTATTGTCTCGGTCTTGTAGGAAGATTC CTACATATGTTCAGTGGGTTGGATTATTTGTCCAATTTCTATAAAAACCATGCACGCAAGAGTGGTCTTTGGTCGAGCATTAAGATGTAAAGAAATATTT GTTTGTGTGCATTCGGTACTGTGTAATAGGCTTCTGCTGGAGTTGTTTTAATTGGTCGCGCGGGCGCATGGGTATTGCTATCTATTTGTAGGAAAGTTCT
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| DNA Sequence for Gene |
>PP_2625
|vasI3
TTGCGCCATATAGGCCATTTGTACTATTCAGAGAGTAAATTCAGGATGATTAACCGCTGTGTATATGGCGCCGGTCTCTCGTTGCTGTTTTGTCTGCAGC CGGTGCTGGCAGGCTCCACGCGGGACTGTCCCCGGATTGTTTCCAACGTCGAGCGACTGGCCTGTTTCGATCAGGCTGCTGGCACCCCGGCGTACACGCC AAAACGGCAGTGGTCTGCACCGGAGCAGCAGGCCCCCACGGTGTTGCGTGTGATGGCAAATGAAGCTGAACGGGCACCGGATGACCTGACGTTTCGCATC GGGAGTCAGACCCAGGACGGGGCAGGCGCGCCAGCGCTTGTGATTTCGGCGCCCGCCATCGCATCGGGTGATGAACGTGCCTACATGGCAATCAGTTGCA TACAGGCCATCTCCCGGCTACAGCTGATTGCCAGGCGTCCGATCGAGGCAAGCTGGGTCAAGGTACGCCTGAGCGGGGAGGGCTGGTCTACCCGTGAGAC GCCCTGGCAAGTGATGGAGAACGGCCAAGTGCTCGATGCCGGGCGGGGCCTGCCCGCCATCGAGCAGATCAGGAAGCTGATCGGTGCCCAGCGTATCGAG GTTGTGAGTGATCACGGCGAGGTCGACGGGCTGACCTTCGATGCGCAAGGCCTGGCCCCCTTGATCAGCCGGGCGCGAAGCACATGTCGGTGGTAG
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
CGCAGGTATCCGGGGAAGAGGTCACTCGGTTGCTCGCGCCGATTGATCCGGCAGTTCCGGCTGGCCTGTTCGATGTCGAGGACGAAACCTATCAGGCCAT TGATCAGGAGATGGTCAAGCTGGGTGGGCTGCAGGAAGCCTCGATCGACTGGGTCTACATCGAAGACGCGTCCCGTCAGTACCTGAGCCAGCAATGCAAG CACTTGCGAATCGTTGCGCACCTGAGTGCCGCATGGTTGCGTAGCGGCTGCTGGGAGCAGTGGGGATGCACCTTGGCGTTGCTGGCCGGCATGCTCGAGT GCTATTGGGAAGCCGCTCATCCCAAGCCGGGGCCGAAAGGCTTCCTGGGCAAGCGCAAGCTGGTTGCCCTGGTGATCGATCGCTTGGCCGAGGCGCTCCC GCGTCTTGATCGTTTTACCTACACCCCGACCCACGCAGCGGCAGCGCAGGCTGCCTTGAAACGCCTGCAACAACAGGAAACAGTACAGCTGGACACGGCA
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| Amino Acid Sequence |
>VasI3
MRHIGHLYYSESKFRMINRCVYGAGLSLLFCLQPVLAGSTRDCPRIVSNVERLACFDQAAGTPAYTPKRQWSAPEQQAPTVLRVMANEAERAPDDLTFRI GSQTQDGAGAPALVISAPAIASGDERAYMAISCIQAISRLQLIARRPIEASWVKVRLSGEGWSTRETPWQVMENGQVLDAGRGLPAIEQIRKLIGAQRIE VVSDHGEVDGLTFDAQGLAPLISRARSTCRW
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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