Pseudomonas putida KT2440, PP_2258

Gene Ontology

Ontology	Accession	Term	GO Evidence	Evidence Ontology (ECO) Code	Reference	Comments

Functional Classifications Manually Assigned by PseudoCAP

Functional Predictions from Interpro

Analysis	Accession	Description	Interpro Accession	Interpro Description	Amino Acid Start	Amino Acid Stop	E-value
SUPERFAMILY	SSF141868	EAL domain-like	IPR035919	EAL domain superfamily	306	553	2.75E-85
Pfam	PF13426	PAS domain	IPR000014	PAS domain	14	116	8.6E-14
Gene3D	G3DSA:3.30.450.20	PAS domain	-	-	3	125	2.8E-29
PANTHER	PTHR44757	DIGUANYLATE CYCLASE DGCP	-	-	17	552	0.0
SMART	SM00052	duf2_2	IPR001633	EAL domain	299	545	3.4E-108
SMART	SM00091	pas_2	IPR000014	PAS domain	3	68	0.0052
Pfam	PF00990	Diguanylate cyclase, GGDEF domain	IPR000160	GGDEF domain	130	285	1.2E-48
CDD	cd00130	PAS	IPR000014	PAS domain	18	114	6.16265E-11
NCBIfam	TIGR00254	JCVI: diguanylate cyclase (GGDEF) domain	IPR000160	GGDEF domain	124	288	7.1E-43
NCBIfam	TIGR00229	JCVI: PAS domain S-box protein	IPR000014	PAS domain	4	120	4.3E-16
Gene3D	G3DSA:3.20.20.450	EAL domain	IPR035919	EAL domain superfamily	298	557	4.7E-95
SMART	SM00267	duf1_3	IPR000160	GGDEF domain	117	289	6.7E-59
SMART	SM00086	pac_2	IPR001610	PAC motif	74	117	1.3E-5
FunFam	G3DSA:3.30.70.270:FF:000001	Diguanylate cyclase domain protein	-	-	123	290	6.8E-41
CDD	cd01949	GGDEF	IPR000160	GGDEF domain	130	287	1.69816E-67
Gene3D	G3DSA:3.30.70.270	-	IPR043128	Reverse transcriptase/Diguanylate cyclase domain	128	295	9.1E-59
SUPERFAMILY	SSF55073	Nucleotide cyclase	IPR029787	Nucleotide cyclase	133	290	1.18E-52
Pfam	PF00563	EAL domain	IPR001633	EAL domain	306	540	2.9E-72
CDD	cd01948	EAL	IPR001633	EAL domain	305	545	1.7461E-110
SUPERFAMILY	SSF55785	PYP-like sensor domain (PAS domain)	IPR035965	PAS domain superfamily	14	119	3.49E-26

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.