Strain | Pseudomonas putida KT2440 chromosome, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
TGATTGGCCGGCGTATCAGCCGCCAGCGCCTGATGCCGTGGCTGTTGGCCGGCATGGGCCTGTTCATCGCCGGCTTGCTGGGTTTTGCGCTGGCAGGCTC GGTACTGGCCTGGTGCCTGGCGATGCTGGTGTTCACGCTGGGCGAAATCATCGTGATCCCGGCCGAGTACATGTTTATCGACCTGATCGCACCGGAGCAC TTGCGCGGGGTGTATTACGGCGCGCAGAACCTGTCCAACCTGGGGGCGGCGCTGGGCCCGGTGATGGTGGGTTTTGCACTGGTACACCTGTGGCCGGGGG CAGTCTTCTACCTGCTGGTGTTGTCGGTGATACTGGCAGGGGTGTTCTATTGGTTGGGTACCCGAAGGGGTTGATGTTGCCTGTTCCGGCCCATTCGCGG GTGAACCCGCTCCTACAACCATCGTCTGCGCTGACGAAGCGGCACTTGCGTGCCAGACTGATTGATCGGGACCGCGTTACCTTTTTGCTTCGGAGTCTTC
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DNA Sequence for Gene |
>PP_1695
|mxtR
ATGTCGTTGTCCAGCGGGCTGATCGCCGTGGTCGCCCTGGCCTATATGGCCATCATGTTCGCCATCGCCTTCTATGGCGACCGCCGCAGCACGCCATTGC CGCCAAAGCTGCGTGCCTGGGTGTACAGCCTGTCGCTGGCCGTGTACTGCACCAGCTGGACCTTCTTCGGCGCGGTCGGCCAGGCCGCCGAACAGCTTTG GGCGTTCCTGCCCATCTACCTGGGCCCGGTACTGCTGCTGATCTTCGCCCCTTGGGTGCTGCAGAAGATGGTGCTGATCAGCAAGCAGCAGAACATCACC TCGATCGCCGACTTCATTGCCGCGCGCTACGGCAAGTCGCAGACCCTGGCAGTGGTGGTGGCACTGATCTGCCTGGTCGGTGTGCTGCCGTACATCGCCT TGCAGCTCAAGGGCATCGTACTGGGCGTGAACCTGCTGATCGGCGCCAACGCCGACGCCACCGGCACCCGCGTGCAGGACACCGCGCTGGTGATATCGCT GGTACTGGCGCTGTTCGCCATCGTCTTCGGTACCCGCAGCCTGGATGTGACCGAGCACCACCGCGGCATGGTCCTGGCGATCGCCTTCGAATCGCTGATC AAGTTGCTGGCGTTCCTTGCCGTGGGCATCTTCATCGTTTTCAACCTGTTTGACGGTTTCGACGACCTGTTCAGCCAGGCCCGCCAGTCGATCCACTTGC AGGACTATTGGAAAGAAACCATCAATTGGCCTTCCATGGTGGTGCAAACCGCCGTGGCGATGATGGCAATCATCTGCCTGCCCCGACAGTTCCACGTTAC CGTGGTGGAGAACATCGAACCGCAGGACTTGCGCCTGGCGCGCTGGGTATTCCCGATGTACCTGGCACTGGCCGCGCTGTTCGTGGTGCCGATTGCCCTG GCCGGGCAGATGCTGCTGCCCGGCACGGTGATCTCCGACTCGTTCGTCATCAGCCTGCCCCTGGCCGAGGCGCACCCGAGCCTTGCCCTGCTGGCGTTCA TCGGCGGTGCCTCGGCGGCTACCGGCATGGTGATCGTCGAGGCCGTGGCGTTGTCGACCATGGTGTCCAACGACATGCTGCTGCCCTGGCTGCTGCGCCG CAACAACGCCGAGCGGCCTTTCGAAGCGTTCCGCCACTGGATGCTTTCGGTACGCCGGGTAACCATCGTGGTGATCCTGCTGCTGGCCTATGTCAGCTAC CGCCTGCTGGGTTCCACCGCCAGCCTGGCGACCATCGGCCAGATTGCCTTTGCCGCTGTGACCCAGCTCACCCCAGCCATGCTTGGCGCGCTGTACTGGA AGCAGGCCAACCGTCGCGGTGTGTTCGCCGGCCTGGCCGCTGGCATTTTCCTGTGGTTCTACACCTTGGTGCTGCCGATTGCCGCGCACAGCCTGGGCTG GTCGTTGCAGTTGTTCCCTGGCCTGGCGTGGCTGCACGGCAACCCGCTGAACCTGCCGATCAGTCCACTGACCCAAGGTGTGGTGCTGTCACTGGCGGGC AACTTCACCCTGTTCGCCTGGGTTTCGGTGCTGTCGCGCACGCGGGTTTCCGAGCACTGGCAGGCCGGCCGGTTCATTGGCCAGCAGACCAGCGCGCGGC CCAGCAGCAAGCCGCTGCTGGCGGTGCAGATCGACGACCTGCTGACCCTGGCCTCGCGCTTTGTCGGGGAAGAGCGCGCACGGCAGAGCTTCATCCGCTT TGCCTACCGCCAGGGCAAGGGTTTCAACCCTAACCAGAACGCCGATGGCGACTGGATCGAGCACACCGAGCGCCTGCTGGCCGGGGTGCTCGGTACCTCG TCGACCCGCGCGGTGGTCAAGGCGGCCATCGAAGGCCGCGACATGCAACTGGAAGACGTGGTGCGCATCGCTGACGAAGCCAGTGAGGTGCTGCAGTTCA ACCGCGCCCTGCTGCAAGGCGCCATCGAGAACATCAACCAAGGCATCAGCGTGGTCGACCAGAACCTGCACCTGGTGGCCTGGAACCGCCGCTACCTGGA ACTGTTCAACTACCCGGACGGACTGATCAGCGTTGGGCGACCGATTGCCGACATCATCCGCTACAACGCCGAGCGCGGCCTGTGCGGCCCCGGCGAGGCA CAGGTGCATGTGGCGCGGCGGCTGCACTGGATGCGCCAGGGCCGCGCGCACTCCTCCGAGCGGCTGTTCCCCAATGGCCGGGTGATCGAGCTGATCGGCA ACCCGATGCCGGGCGGTGGCTTTGTCATGAGCTTCACCGACATCACCCCGTTCCGCGAGGCCGAGCAGGCCCTGCGCGATGCCAACGAACGCCTTGAGCA ACGCGTGGCGGAGCGCACCCACGAACTGTCGCAGTTGAACCAGGCGCTGTCCGAAGCCAAGAGCCAGGCCGAAGCGGTGAGCAACTCCAAGACCCGCTTC CTGGCCGCCGTCAGCCATGACCTGATGCAACCGTTGAACGCCGCACGGCTTTTCTCTGCCGCCTTGTCGCAACAGGCCGAGGGCATGAACGAAGAGGCCC GGCAGTTGGTACAGCACATGGACAGCTCGCTGCGCTCGGCTGAAGAGCTGATCAGCGACCTGTTGGACATCTCGCGCCTGGAAAACGGCAAGATCACCCC GGATGCCAAACCCTTCGCCCTCAACGAACTGTTCGACACCCTGGGCGCCGAGTTCAAGCTGCTGGCGGCCGAGAAAGGCCTGGAGTTCCGCCTGCGCGGC AGCCGCCTGCGGGTGGACAGCGACATGAAACTGCTACGCCGGGTGCTGCAGAACTTCCTCACCAATGCCCTGCGCTACGGCAAGAGCCCGATCCTGCTGG GCGCGCGCCGACAGGGCGAGCGCCTGTGGCTGGAGGTCTGGGACCGTGGCCCGGGCATTGCTGACGACAAGCTGCAAGTGATCTTTCAGGAGTTCAAGCG CCTGGACAGCCACCAGACCCGTGCCGAGAAGGGGCTAGGCTTGGGCCTGGCCATTGCAGACGGTCTGTGTCGGGTGCTGGGGCATCCGCTGGAAGTGCGC TCATGGCCAGGCAAGGGCACGGTGTTCCGCGTCAGCGTACCGATTGCACGCCAGGCCGCCGCGGCGCCAAGCACGCCCGTGGAACAACAGGGCGGCCAGC CACTGGCCGGGCTGCAAGTGCTATGCGTGGACAACGAAGACAGCATCCTGATCGGCATGAACAGCCTGCTGAGCCGCTGGGGTTGCCAGGTATGGACCGC GCGCAACCAGGCCGAATGCGAAGCCCTGCTGGCCAAAGGCATGCGCCCGCACCTGGCATTGGTGGACTACCACCTGGACGACGGCGAGACCGGCACCGGG CTGATGGGCTGGCTTCGAGCACGGCTGGGTGAGCCGGTACCCGGTGTAGTGATCAGCGCCGACGGCAGCAAGGAAACCATCGCCCTGGTACATGCATCAG GGCTGGACTACCTGGCCAAACCGGTCAAGCCTGCGGCCTTGCGCGCCCTGCTCAATCGCCATCTGAGCCTGGCTCAGTAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
CCGCTACCTCGGGCAGCGCCTCATCGGACAGCGCCCGCTCCAGCAGGTCTGCCGGCAAGCTCTTGCTGGCACGGGCGCCCAGCAGCTTAAGCTGCTCGCT ACGGCTAACCAGGTTGCCACGCCCTTCGCACAGCTTGTTGCGCGCTGCCGCATAAGCCTTGTCCACCTGCTGCAAGCGGCTGCCCAGTTCGTCCAGGTCC TGGATGAACAGCACGAACTTGTCGTAGAGCCAGCCGGCCCGCTCGGCAATTTCGCGGGCGTTCTGCCCTTGACGCTCCTGCTTCCACAGGCTGTCGATAA CCCGCAAGGTGGCCAGCAACGTGGTAGGGCTGACAATCACGATCTGCCGGTCGAAGGCCTCCTGGAACAGGTTCGGCTCGGCCTGCAGGGCCGCCGAAAA GGCCGCCTCGATGGGCACGAACAACAACACGAAGTCCAGGCTGTGCAGGCCTTCGAGGCGGCTGTAGTCCTTGCTCGACAGGCCTTTGACGTGGCTGCGC
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Amino Acid Sequence |
>sensor kinase MxtR
MSLSSGLIAVVALAYMAIMFAIAFYGDRRSTPLPPKLRAWVYSLSLAVYCTSWTFFGAVGQAAEQLWAFLPIYLGPVLLLIFAPWVLQKMVLISKQQNIT SIADFIAARYGKSQTLAVVVALICLVGVLPYIALQLKGIVLGVNLLIGANADATGTRVQDTALVISLVLALFAIVFGTRSLDVTEHHRGMVLAIAFESLI KLLAFLAVGIFIVFNLFDGFDDLFSQARQSIHLQDYWKETINWPSMVVQTAVAMMAIICLPRQFHVTVVENIEPQDLRLARWVFPMYLALAALFVVPIAL AGQMLLPGTVISDSFVISLPLAEAHPSLALLAFIGGASAATGMVIVEAVALSTMVSNDMLLPWLLRRNNAERPFEAFRHWMLSVRRVTIVVILLLAYVSY RLLGSTASLATIGQIAFAAVTQLTPAMLGALYWKQANRRGVFAGLAAGIFLWFYTLVLPIAAHSLGWSLQLFPGLAWLHGNPLNLPISPLTQGVVLSLAG NFTLFAWVSVLSRTRVSEHWQAGRFIGQQTSARPSSKPLLAVQIDDLLTLASRFVGEERARQSFIRFAYRQGKGFNPNQNADGDWIEHTERLLAGVLGTS STRAVVKAAIEGRDMQLEDVVRIADEASEVLQFNRALLQGAIENINQGISVVDQNLHLVAWNRRYLELFNYPDGLISVGRPIADIIRYNAERGLCGPGEA QVHVARRLHWMRQGRAHSSERLFPNGRVIELIGNPMPGGGFVMSFTDITPFREAEQALRDANERLEQRVAERTHELSQLNQALSEAKSQAEAVSNSKTRF LAAVSHDLMQPLNAARLFSAALSQQAEGMNEEARQLVQHMDSSLRSAEELISDLLDISRLENGKITPDAKPFALNELFDTLGAEFKLLAAEKGLEFRLRG SRLRVDSDMKLLRRVLQNFLTNALRYGKSPILLGARRQGERLWLEVWDRGPGIADDKLQVIFQEFKRLDSHQTRAEKGLGLGLAIADGLCRVLGHPLEVR SWPGKGTVFRVSVPIARQAAAAPSTPVEQQGGQPLAGLQVLCVDNEDSILIGMNSLLSRWGCQVWTARNQAECEALLAKGMRPHLALVDYHLDDGETGTG LMGWLRARLGEPVPGVVISADGSKETIALVHASGLDYLAKPVKPAALRALLNRHLSLAQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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