Pseudomonas aeruginosa 2192, PA2G_04690
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Gene Ontology
| Ontology | Accession | Term | GO Evidence | Evidence Ontology (ECO) Code | Reference | Comments |
|---|---|---|---|---|---|---|
| Biological Process | GO:1900378 | positive regulation of secondary metabolite biosynthetic process |
Inferred from Sequence or Structural Similarity
Term mapped from: PseudoCAP:PA5255
|
ECO:0000249 sequence similarity evidence used in automatic assertion |
16030202 | |
| Biological Process | GO:1900192 | positive regulation of single-species biofilm formation |
Inferred from Sequence or Structural Similarity
Term mapped from: PseudoCAP:PA5255
|
ECO:0000249 sequence similarity evidence used in automatic assertion |
2544550 | |
| Biological Process | GO:0045861 | negative regulation of proteolysis |
Inferred from Sequence or Structural Similarity
Term mapped from: PseudoCAP:PA5255
|
ECO:0000249 sequence similarity evidence used in automatic assertion |
12706510 | |
| Biological Process | GO:0006355 | regulation of transcription, DNA-templated |
Inferred from Sequence or Structural Similarity
Term mapped from: PseudoCAP:PA5255
|
ECO:0000249 sequence similarity evidence used in automatic assertion |
12706510 | |
| Biological Process | GO:0006355 | regulation of transcription, DNA-templated |
Inferred from Sequence Model
Term mapped from: InterPro:PIRSF016548
|
ECO:0000259 match to InterPro signature evidence used in automatic assertion |
Functional Classifications Manually Assigned by PseudoCAP
|
Functional Predictions from Interpro
| Analysis | Accession | Description | Interpro Accession | Interpro Description | Amino Acid Start | Amino Acid Stop | E-value |
|---|---|---|---|---|---|---|---|
| Pfam | PF04353 | Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ | IPR007448 | Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ | 1 | 145 | 2.5E-54 |
| PIRSF | PIRSF016548 | Rsd_AlgQ | IPR007448 | Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ | 1 | 155 | 2.2E-68 |
| Gene3D | G3DSA:1.20.120.1370 | Regulator of RNA polymerase sigma(70) subunit, domain 4 | IPR038309 | Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ superfamily | 1 | 153 | 1.2E-50 |
Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.