Pseudomonas aeruginosa 2192, PA2G_04597

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:1901031 regulation of response to reactive oxygen species
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: PseudoCAP:PA5344
 ECO:0000249
sequence similarity evidence used in automatic assertion		 19933365
Biological Process GO:2000147 positive regulation of cell motility
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: PseudoCAP:PA5344
 ECO:0000249
sequence similarity evidence used in automatic assertion		 19926657
Biological Process GO:1900377 negative regulation of secondary metabolite biosynthetic process
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: PseudoCAP:PA5344
 ECO:0000249
sequence similarity evidence used in automatic assertion		 19926657
Biological Process GO:0046889 positive regulation of lipid biosynthetic process
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: PseudoCAP:PA5344
 ECO:0000249
sequence similarity evidence used in automatic assertion		 19926657
Biological Process GO:1901671 positive regulation of superoxide dismutase activity
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: PseudoCAP:PA5344
 ECO:0000249
sequence similarity evidence used in automatic assertion		 19926657
Molecular Function GO:0000976 transcription regulatory region sequence-specific DNA binding
ISS
Inferred from Sequence or Structural Similarity
Term mapped from: PseudoCAP:PA5344
 ECO:0000249
sequence similarity evidence used in automatic assertion		 19933365
Biological Process GO:0006355 regulation of transcription, DNA-templated
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00126
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0003700 DNA-binding transcription factor activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:PF00126
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Transcriptional regulators Other 2192 genes in this class

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF03466 LysR substrate binding domain IPR005119 LysR, substrate-binding 88 294 8.3E-45
FunFam G3DSA:3.40.190.10:FF:000149 LysR family transcriptional regulator - - 161 268 1.2E-68
Gene3D G3DSA:3.40.190.10 - - - 161 268 1.2E-91
SUPERFAMILY SSF46785 Winged helix DNA-binding domain IPR036390 Winged helix DNA-binding domain superfamily 1 85 6.2E-20
PRINTS PR00039 LysR bacterial regulatory protein HTH signature IPR000847 Transcription regulator HTH, LysR 39 50 3.3E-8
SUPERFAMILY SSF53850 Periplasmic binding protein-like II - - 88 294 1.02E-37
PRINTS PR00039 LysR bacterial regulatory protein HTH signature IPR000847 Transcription regulator HTH, LysR 29 39 3.3E-8
Gene3D G3DSA:1.10.10.10 - IPR036388 Winged helix-like DNA-binding domain superfamily 1 85 2.3E-26
Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family IPR000847 Transcription regulator HTH, LysR 4 62 9.9E-18
CDD cd08411 PBP2_OxyR - - 92 293 6.87993E-89
PRINTS PR00039 LysR bacterial regulatory protein HTH signature IPR000847 Transcription regulator HTH, LysR 18 29 3.3E-8
PANTHER PTHR30346 TRANSCRIPTIONAL DUAL REGULATOR HCAR-RELATED - - 1 294 3.8E-76
FunFam G3DSA:1.10.10.10:FF:000001 LysR family transcriptional regulator - - 1 84 4.0E-26
Gene3D G3DSA:3.40.190.10 - - - 92 293 1.2E-91

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.