Pseudomonas aeruginosa NCGM2.S1, NCGM2_RS28620

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0007165 signal transduction
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF50341
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Biological Process GO:0006935 chemotaxis
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF50341
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pnc02025 Biofilm formation - Pseudomonas aeruginosa 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pnc02020 Two-component system 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
Pfam PF01584 CheW-like domain IPR002545 CheW-like domain 38 170 7.6E-27
Gene3D G3DSA:2.30.30.40 SH3 Domains - - 39 157 4.7E-21
PANTHER PTHR22617 CHEMOTAXIS SENSOR HISTIDINE KINASE-RELATED IPR039315 Chemotaxis protein CheW 28 170 5.0E-23
SUPERFAMILY SSF50341 CheW-like IPR036061 CheW-like domain superfamily 33 170 3.79E-28
SMART SM00260 chew_2 IPR002545 CheW-like domain 32 168 2.1E-29
Gene3D G3DSA:2.40.50.180 - - - 55 121 4.7E-21
CDD cd00732 CheW - - 34 171 2.63924E-47

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.