Pseudomonas aeruginosa NCGM2.S1, NCGM2_RS28535
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa NCGM2.S1 DNA, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
GGTGGTGTTCCTCTGCCTGGCGGCCCTGTACGAAAGCTGGTCGATTCCGTTCTCGGTGATGCTGGTGGTGCCGTTGGGCGTGATCGGCGCGCTGCTGGCG ACGTCCATGCGCGGCCTGTCCAACGACGTGTTCTTCCAGGTGGGCCTGTTGACGACCATCGGCCTGTCGGCGAAGAACGCCATTCTCATCGTGGAGTTCG CCAAGGAGCTGCACGAGCAGGGCAAGGACATCGTCGAGGCGGCCATCGAGGCCTGCCGCATGCGTCTGCGGCCGATCGTGATGACCTCCCTGGCGTTCAT CCTCGGTGTGGTTCCGCTGGCGATCTCCACCGGCGCCGGCTCGGGCAGCCAGCATGCGATCGGTACCGGCGTGATCGGCGGCATGGTCACTGCGACCGTC CTGGCGATCTTCTGGGTACCGCTGTTCTACGTGGCGGTCAGCACGCTGTTCAAGGACGAGGCGTCCAAGCAGCAGGCTGAGGCCGAAAAGGGGCAATGAT
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| DNA Sequence for Gene |
>NCGM2_RS28535
ATGAAAAGGTCCTTCCTTTCCCTGGCGGTAGCCGCTGTCGTTCTGTCCGGCTGCTCGCTGATTCCCGACTACCAGCGCCCCGAGGCGCCGGTAGCCGCGG CCTACCCGCAAGGGCAGGCCTACGGGCAGAACACCGGCGCGGCGGCCGTTCCGGCCGCCGACATCGGCTGGCGCGAGTTCTTCCGCGACCCGCAGTTGCA GCAACTGATCGGCGTGGCGCTGGAAAACAACCGCGACCTGCGGGTCGCCGCGTTGAACGTCGAGGCCTTCCGGGCGCAGTACCGCATCCAGCGGGCCGAC CTGTTCCCGCGGATCGGCGTGGATGGTAGCGGCACCCGCCAGCGTTTGCCGGGCGACCTGTCGACCACCGGCAGTCCGGCGATTTCCAGCCAGTACGGGG TGACCCTGGGCACTACCGCCTGGGAACTCGATCTCTTCGGCCGCCTGCGCAGCCTGCGCGACCAGGCCCTGGAGCAGTACCTGGCGACCGAACAGGCGCA GCGCAGCGCGCAGACCACCCTGGTGGCCAGCGTGGCGACCGCCTACCTGACGCTGAAGGCCGACCAGGCGCAGTTGCAACTGACCAAGGACACCCTGGGC ACCTACCAGAAGAGTTTCGACCTGACCCAGCGCAGCTACGACGTCGGCGTCGCCTCCGCGCTCGACCTGCGCCAGGCGCAGACCGCCGTGGAAGGCGCCC GCGCGACCCTGGCGCAGTACACCCGCCTGGTAGCCCAGGACCAGAATGCGCTGGTCCTGCTGCTGGGCTCCGGGATCCCGGCGAACCTGCCGCAAGGCCT GGGCCTGGACCAGACCCTGCTGACCGAAGTGCCGGCGGGTCTGCCGTCGGACCTGCTGCAACGGCGCCCGGACATCCTCGAGGCCGAGCACCAGCTCATG GCCGCCAACGCCAGCATCGGCGCCGCGCGCGCGGCGTTCTTCCCGAGCATCAGCCTGACCGCCAACGCCGGCACCATGAGCCGCCAGCTGTCCGGCCTGT TCGACGCCGGTTCGGGCTCCTGGTTGTTCCAGCCGTCGATCAACCTGCCGATCTTCACCGCCGGCAGCCTGCGCGCCAGCCTGGACTACGCGAAGATCCA GAAGGACATCAACGTCGCGCAGTACGAGAAGGCGATCCAGACCGCCTTCCAGGAAGTCGCCGACGGTCTGGCCGCGCGCGGTACCTTCACCGAGCAGTTG CAGGCACAGCGCGATCTGGTCAAGGCCAGCGACGAGTACTACCAGCTCGCCGACAAGCGCTACCGCACGGGGGTGGACAACTACCTGACCCTGCTCGACG CGCAACGCTCGCTGTTCACCGCGCAGCAGCAACTGATCACCGACCGCCTCAACCAGCTGACCAGCGAGGTCAACCTGTACAAGGCCCTCGGCGGCGGCTG GAACCAGCAGACCGTGACCCAGCAGCAGACCGCGAAGAAGGAAGATCCGCAGGCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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| DNA Sequence Downstream of Gene |
TCGCCTTCCGCGCCATGCAAGAACGCCGACCCTAGGGTCGGCGTTTTTTTATCCTCGCGGAAGTCGGCGGGTCCGCGTCACGGACCCGCTCGGCCTTAGC GGTTGCGGGTCAGCAGTGCGGGGCGCTCGCCCTTGCGCCGCGGCTCCAGCTCGTCGAGCTGCTCGGCGGTGGGGAAGCGATCCATGCGCACCAGGTCGCG CTTGTTGATCACCACCGGCTGGCGGCTCGGCTGCTTGCCGGTGCCGTACTCGGACGGCTCGCGCAGCGGCGCGTCGCTCATCCGCGAGGCATTCTCGCGA CCCTGGCCGCGCGGCTTGCTGGCGCGCGGTTTCTTCGCCTTGCCCTGGCCGGCACCCTGACCGCGAGCGCCGCCTTGAGCGGCGCCCTGGCTCTTGCCGC GAGCTTGGCCCTGGCCTTGGCCACGACCCTGCTGGCCGGTACCGCCCTGGGGTTTCTGCTGGCCACCGCGGCGTCCGCGTCCCTTGTTTTCCTGGCCCTG
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| Amino Acid Sequence |
>adeC/adeK/oprM family multidrug efflux complex outer membrane factor
MKRSFLSLAVAAVVLSGCSLIPDYQRPEAPVAAAYPQGQAYGQNTGAAAVPAADIGWREFFRDPQLQQLIGVALENNRDLRVAALNVEAFRAQYRIQRAD LFPRIGVDGSGTRQRLPGDLSTTGSPAISSQYGVTLGTTAWELDLFGRLRSLRDQALEQYLATEQAQRSAQTTLVASVATAYLTLKADQAQLQLTKDTLG TYQKSFDLTQRSYDVGVASALDLRQAQTAVEGARATLAQYTRLVAQDQNALVLLLGSGIPANLPQGLGLDQTLLTEVPAGLPSDLLQRRPDILEAEHQLM AANASIGAARAAFFPSISLTANAGTMSRQLSGLFDAGSGSWLFQPSINLPIFTAGSLRASLDYAKIQKDINVAQYEKAIQTAFQEVADGLAARGTFTEQL QAQRDLVKASDEYYQLADKRYRTGVDNYLTLLDAQRSLFTAQQQLITDRLNQLTSEVNLYKALGGGWNQQTVTQQQTAKKEDPQA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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