Pseudomonas aeruginosa NCGM2.S1, NCGM2_RS27655
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa NCGM2.S1 DNA, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
CTGGAATGTCACTTCCGATTTCAATTGGAACCCAAACACCAGCCGCACCGAGTCCGGCAGTGCAATGTTCCACTACCAACCGGAAAACAACCCGAACAAG GTCGTCAATGCGGGCTATCGCTATCGCGAAGACTCCCGTCGCTTCAACAGCTCCACCGGGCGCTTCGAATATGGTCGCGAAAACGACATCATCAAGCAGC ACGACTTCTCGGTCATCTGGCCGCTGGTGCCGCAGTGGTCCGTGCTCGCCCGCTGGCAGTACGACTACAACAAGAACCGCACACTCGAGGCCTTCGGCGG CTTCGAATACGACAGCTGCTGCTGGAAGCTGCGCCTGATCAACCGCTACTGGCTGGATGTGGACGATGACGCCTTCCTCGTGCAGAGCGAGAAGGCCGAC CGCGGCATCTTCCTGCAGATCGTCCTGAAGGGCCTCGGCGGCATCGTGGGCAACAAGACGGAAATGTTCCTCGACAAAGGCATCCAAGGTTATCGTCAAC
|
|
| DNA Sequence for Gene |
>NCGM2_RS27655
GTGAAGATCAAGCTATGTAACCGGCTGCGCCCCCTTGCATTGGGCGCAGCACTCCTTTGCTCCTTCGCGCATGCCGAAGTGGTACCACTGGACCGGGTCG TCGCCATCGTCGACAACGATGTGATCATGCAGAGCCAGCTCGACCAGCGCCTGCGTGAAGTGCACCAGACGCTGCTCAAGCGCGGTGCGCCGCTGCCGCC CGAGCACGTGCTGACCCAGCAGGTGCTGGAACGCCTGATCATCGAGAACATCCAGCAGCAGATCGGCGACCGCTCCGGCATCCGCATCTCCGACGAGGAG CTGAACCAGGCGATGGGCACCATCGCCCAGCGCAACGGCATGAGCCTGGAGCAGTTCCAGGCCGCCCTCACCCGCGACGGCCTGTCCTACGCCGACGCCC GCGAGCAGGTCCGTCGCGAGATGGTGATCAGCCGTGTGCGCCAGCGCCGGGTCGCCGAGCGCATCCAGGTCAGCGAGCAGGAGGTGAAGAACTTCCTTGC CTCGGACATGGGCAAGATCCAGCTTTCCGAAGAGTACCGCCTGGCCAATATCCTGATCCCGGTGCCTGAAGCCGCGTCCTCGGACGTGATCCAGGCCGCC GCAAGGCAGGCCCAGGAGCTCTACCAGCAGCTCAAGCAGGGCGCCGACTTCGGCCAACTGGCGATTTCCCGCTCGGCCGGCGACAACGCCCTGGAAGGCG GCGAGATCGGCTGGCGCAAGGCCGCCCAGCTGCCGCAGCCGTTCGACAGCATGATCGGCTCCCTGGCCGTCGGCGACGTCACCGAGCCTGTCCGCACCCC CGGCGGCTTCATCATCCTCAAGCTGGAAGAGAAGCGCGGCGGCAGCAAGATGGTCCGTGACGAGGTGCATGTCCGCCATATCCTGCTCAAGCCCAGCGAA ATCCGCAGCGAAGCGGAGACCGAGAAGCTGGCGCAGAAGCTGTACGAGCGCATCCAGTCCGGGGAAGACTTCGGCGAACTGGCGAAGAGCTTCTCCGAAG ATCCGGGTTCCGCCCTCAACGGCGGCGACCTGAACTGGATCGATCCGGAAGCCCTAGTGCCCGAGTTCCGCCAGGTGATGAACGATACCCCGCAGGGCGA GCTGTCCAAGCCGTTCCGCTCGCAGTTCGGCTGGCACATCCTGCAGGTCCTCGGCCGTCGCGCCACCGACAGCAGCGAGAAGTTCCGCGAGCAGCAGGCG GTAAGCGTACTGCGCAACCGCAAGTACGACGAGGAACTGCAAGCCTGGCTGCGGCAGATCCGCGACGAGGCCTACGTGGAAATCAAGCAGTGA
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GCCTGCGCTTCGCGCTCACTCCAGGCGAGCCGGCAGGTATCGGACCCGATCTGTGTCTGCTGCTCGCCCGCTCCGCCCAGCCCCACCCCCTGATCGCCAT CGCCAGCCGCACGCTCCTGCAAGAGCGCGCCGGCCAACTGGGCCTGGCGATCGACCTTAAGGACGTTTCCCCGGCCGCCTGGCCAGAGCGACCGGCCAAG GCCGGCCAACTGTACATATGGGATACGCCCCTGGCCGCCCCGGTCCGGCCCGGGCAATTGGACCGAGCCAACGCCGCCTACGTCCTGGAAACCCTGACCC GCGCCGGCCAGGGCTGCCTCGACGGGCACTTCGCCGGGATGATCACCGCACCGGTGCACAAGGGCGTGATCAACGAAGCCGGCATCCCCTTTTCCGGCCA TACCGAATTCCTCGCCGACCTCACCCACACCGCCCAGGTGGTGATGATGCTGGCCACTCGTGGCCTGCGCGTTGCCCTGGCGACCACCCACCTGCCGCTG
|
|
| Amino Acid Sequence |
>peptidyl-prolyl cis-trans isomerase
MKIKLCNRLRPLALGAALLCSFAHAEVVPLDRVVAIVDNDVIMQSQLDQRLREVHQTLLKRGAPLPPEHVLTQQVLERLIIENIQQQIGDRSGIRISDEE LNQAMGTIAQRNGMSLEQFQAALTRDGLSYADAREQVRREMVISRVRQRRVAERIQVSEQEVKNFLASDMGKIQLSEEYRLANILIPVPEAASSDVIQAA ARQAQELYQQLKQGADFGQLAISRSAGDNALEGGEIGWRKAAQLPQPFDSMIGSLAVGDVTEPVRTPGGFIILKLEEKRGGSKMVRDEVHVRHILLKPSE IRSEAETEKLAQKLYERIQSGEDFGELAKSFSEDPGSALNGGDLNWIDPEALVPEFRQVMNDTPQGELSKPFRSQFGWHILQVLGRRATDSSEKFREQQA VSVLRNRKYDEELQAWLRQIRDEAYVEIKQ
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|