Strain | Pseudomonas aeruginosa NCGM2.S1 DNA, complete genome. [Details] | |
DNA Sequence Upstream of Gene |
CGGACAGGGGAAGCAGGAGCAGCAGTACGAGCAGCAGGCGGCGCATGAGAACGATCCGGAGCCGGGTGAAAAGGCGGCTATTATAGGCGCGACCGTTTCC CCTGAGCCGCCGACATGCCCACCGCCAAGCCCGAAATCGTCATCACCTATTGCACCCAGTGCCAGTGGCTACTGCGTGCCGCCTGGCTGGCCCAGGAACT GCTCAGCACCTTCGCCGACGATCTCGGAAAAGTCTGCCTGGAGCCCGGAACCGGTGGCGTCTTCCGTATCACCTGCGACGGCGTGCAGGTCTGGGAACGC AAGGCCGACGGCGGCTTCCCCGAGGCCAAGGCGCTCAAACAGCGGGTTCGCGACCGCATCGACCCGCAACGCGACCTCGGTCACAACGATCGTCCTTCCC GCTGAACCGCTGCCGTCCGCCCATGGCTTGTTGCAGGTCAACGGGCGGCACGGCGCATAGGCATAGCCTGGGGGCATTCATCCTGTCGAAGGGAGTGCCC
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DNA Sequence for Gene |
>NCGM2_RS22130
ATGAGCATCATCGTCACCGGCGCCGCCGGCTTCATCGGCAGCAATCTGCTGCAGGCGCTGAACCGGCGCGGCGAGACCGACATCATCGCGGTGGACGATC TCACCGACGGCGAGCAGTTCCGCAACCTGGCGGACGCCGATATCGCCGACTACCTGGACCAGAACGACTTCCTCGAGCGCTACGCCCGCGGCGACTTCGG CACGGTCCGCGCGCTGTTCCACCAGGGCGCCTGCGCCAGCACCCTGGAAAGCAATGGCCGCTACATGATGGAGAACAACTACCGCTACAGTTGCCGCCTG CTGGAAAGCAGCCTGGAACTCGGCGTGCCGTTCCTCTACGCCTCGTCGGCGGCGGTCTACGGCGCCGGCCGGACCTTCCGCGAGGCGCGCCAGTACGAGC GGCCGCTGAACGTCTACGGCTATTCCAAGTTCCTCTTCGACCAGCGTGTGCGGCGGGCGCTGCCGCAGGCGCGCAGCCAGGTGGTCGGCCTGCGTTACTT CAACGTCTACGGGCCGCGCGAGGAACACAAGGGGCGGATGGCCTCGGTGGCCTACCACTGCTACCAGCAATTGCGCCGCGACGGGCGGGTCGAACTGTTC GGCGAACACGGTGGCTTCCCGCCCGGCGGCCACCTGCGCGACTTCGTCGCGGTGGAGGACGTGGCGCGGGTCAACCTGCATTTCTTCGATCATCCGCAGC GTTCGGGAATCTTCAACCTCGGCAGCGGCCAGGCGCGGACCTTCAACGAGGTCGCCCTGGCGGTGATCAATAGCGTCCGCGCCAACGCCGACCAGCCGCC CCTGTCGCTGCAACAGGCCGTGGAAAGCGGCCTGCTCGGCTACCGCGAGTTCCCCGAGTCGCTGCGGGCGCGCTACCAGAGCCATACCTGCGCCGACCTG GAGCTGCTGCGCGAGGCGGGCTACCGCGACGATTTCCAGAGCCTGGAAGAGGGCGTCTCCGGCTACTGCCGCTGGCTGGCGCGCAGTGCCTGA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
GGGATCCTGCTCAGCGGCCCAGCGCCCCGCCTACCGGGGTGCGGGCGAAGCGCAGCTCCGGCAGCAGGGTCAGCAGCGCCAGCACCCCGAGGGCCGCGCC GACCCAGAGCGCGCCCTGCAGGCCGAATCCGCCGGCGATGCCCAGGCCGCCGATCCAGGAACCGGCCATCACGCCGAGCATGATGCAGGCGGTGTGCACC GAGTTGACCAGCATGTTGTTATGGCCGACCCGTGCGCCGCGGGTCACCAGCGCTGGGTTCATCGACACCCCGGTCAGGCCGATCACCACCAGCGCCGCCA CCGCCACCGCCGGAACCTGTCCGAACAGGGCGAAGGCCACCATCGCGGCGATGGCCGCCAGCAGGCCGAAGGCCAGGACCGCGATGGTATGGCGGTCGGC CAGGCGGCCGACGATGTTGTTGCCCACCAGCGTCGCCAGGCCGTAGACCACCAGCAGCAGCGGTACGGTCGAGGCGGAGAAGCCGCTGACCTCGGTGAGG
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Amino Acid Sequence |
>ADP-L-glycero-D-manno-heptose-6-epimerase
MSIIVTGAAGFIGSNLLQALNRRGETDIIAVDDLTDGEQFRNLADADIADYLDQNDFLERYARGDFGTVRALFHQGACASTLESNGRYMMENNYRYSCRL LESSLELGVPFLYASSAAVYGAGRTFREARQYERPLNVYGYSKFLFDQRVRRALPQARSQVVGLRYFNVYGPREEHKGRMASVAYHCYQQLRRDGRVELF GEHGGFPPGGHLRDFVAVEDVARVNLHFFDHPQRSGIFNLGSGQARTFNEVALAVINSVRANADQPPLSLQQAVESGLLGYREFPESLRARYQSHTCADL ELLREAGYRDDFQSLEEGVSGYCRWLARSA
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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