Pseudomonas aeruginosa NCGM2.S1, NCGM2_RS07375

Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown

Gene Ontology

Ontology Accession Term GO Evidence Evidence Ontology (ECO) Code Reference Comments
Biological Process GO:0006508 proteolysis
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR02037
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0005515 protein binding
ISM
Inferred from Sequence Model
Term mapped from: InterPro:SSF50156
 ECO:0000259
match to InterPro signature evidence used in automatic assertion
Molecular Function GO:0004252 serine-type endopeptidase activity
ISM
Inferred from Sequence Model
Term mapped from: InterPro:TIGR02037
 ECO:0000259
match to InterPro signature evidence used in automatic assertion

Functional Classifications Manually Assigned by PseudoCAP

Pathways

Database Xref Pathway Version Evidence PMID
KEGG pnc02020 Two-component system 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion
KEGG pnc01503 Cationic antimicrobial peptide (CAMP) resistance 81.0+/01-23, Jan 17 ECO:0000249
sequence similarity evidence used in automatic assertion

Functional Predictions from Interpro

Analysis Accession Description Interpro Accession Interpro Description Amino Acid Start Amino Acid Stop E-value
FunFam G3DSA:2.30.42.10:FF:000037 Periplasmic serine endoprotease DegP-like - - 268 369 1.5E-34
CDD cd00987 PDZ_serine_protease - - 270 359 8.75556E-27
PRINTS PR00834 HtrA/DegQ protease family signature IPR001940 Peptidase S1C 128 148 4.7E-53
Gene3D G3DSA:2.30.42.10 - IPR036034 PDZ superfamily 381 474 1.1E-17
Pfam PF13180 PDZ domain IPR001478 PDZ domain 272 359 2.8E-17
SUPERFAMILY SSF50156 PDZ domain-like IPR036034 PDZ superfamily 252 358 4.05E-23
PRINTS PR00834 HtrA/DegQ protease family signature IPR001940 Peptidase S1C 224 241 4.7E-53
Gene3D G3DSA:2.30.42.10 - IPR036034 PDZ superfamily 268 369 3.4E-28
CDD cd00987 PDZ_serine_protease - - 385 470 9.20473E-18
SMART SM00228 pdz_new IPR001478 PDZ domain 384 463 3.7E-11
Gene3D G3DSA:2.40.10.120 - - - 27 263 3.0E-85
PANTHER PTHR22939 SERINE PROTEASE FAMILY S1C HTRA-RELATED - - 23 362 1.2E-101
FunFam G3DSA:2.40.10.120:FF:000007 Periplasmic serine endoprotease DegP-like - - 28 263 2.3E-106
PRINTS PR00834 HtrA/DegQ protease family signature IPR001940 Peptidase S1C 310 322 4.7E-53
SMART SM00228 pdz_new IPR001478 PDZ domain 270 352 3.9E-15
Pfam PF13365 Trypsin-like peptidase domain - - 98 231 3.2E-34
NCBIfam TIGR02037 JCVI: Do family serine endopeptidase IPR011782 Peptidase S1C, Do 28 470 0.0
SUPERFAMILY SSF50156 PDZ domain-like IPR036034 PDZ superfamily 385 472 4.86E-15
PRINTS PR00834 HtrA/DegQ protease family signature IPR001940 Peptidase S1C 168 192 4.7E-53
PRINTS PR00834 HtrA/DegQ protease family signature IPR001940 Peptidase S1C 202 219 4.7E-53
SUPERFAMILY SSF50494 Trypsin-like serine proteases IPR009003 Peptidase S1, PA clan 6 279 4.72E-70
Pfam PF02163 Peptidase family M50 IPR008915 Peptidase M50 239 376 4.8E-11
PRINTS PR00834 HtrA/DegQ protease family signature IPR001940 Peptidase S1C 107 119 4.7E-53
Pfam PF13180 PDZ domain IPR001478 PDZ domain 386 466 1.4E-9

Search for additional functional domains at the NCBI CDD database website. Go to this protein's amino acid sequence and follow the link.