Pseudomonas aeruginosa NCGM2.S1, NCGM2_RS01305
Cytoplasmic
Cytoplasmic Membrane
Periplasmic
Outer Membrane
Extracellular
Unknown
Sequence Data
| Strain | Pseudomonas aeruginosa NCGM2.S1 DNA, complete genome. [Details] | |
| DNA Sequence Upstream of Gene |
TGACTGATACAGCGCCGAGCAATATTGAATACCGCGATCCGAGTGGTGGACCAGTGACTGGCGACGCTGCCGTTTGCGTAGGGCCTGCCTAAAGGCTTGT GCAACTGACTTGGCATGCAGGCTTTCATGCACATGGTGACCTGCCCCCCGATTTCAGTACCACGTCAAACTTAGTAGAGTCCGTTTTCCGAGCAGGAGAC GGCAGTGAAAAAGCGTTTTACCGAAGAGCAGATTCTCGACTTCCTCAAGCAGGCGGAGGCCGGTGTGCCGGTGAAGGAACTGTGTCGCCGACACGGCTTC AGTGATGCCTCGTTCTACACCTGGCGGGCCAAGTTTGGCGGTATGACCGTGGCGGACGCCAAACGGTTGAAGGATCTTGAACTGGAAAACAGCCGATTGA AGAAGTTGCTCGCCGAGGCCCACCTCGACATCGAGTCGCTGAAAGTGGTCGCCCGGGGAAAAGGGTAAGCCCGACAGCACGGCGGGAGGCGGTGCAGGAG
|
|
| DNA Sequence for Gene |
>NCGM2_RS01305
ATGCAGGCGCGAACCGGCATCTCCGAGCGTCGTGCCTGTCAGTTGATCGGGCTGTCCCGCTCGGTGTTGCGCTACCAGCCGCGAGCCAGTGTGCAAAACA CCGAGCTGCAAGCCCAACTGGTGGAACTGGCCCAAGAGCGCCGGCGCTTTGGCTATCGCCGCCTGCACATCCTGCTGCGGCGTGCTGGCGTGCAGGTCAA CCACAAGCGGATCTATCGCCTGTACCGCGCTGCCGGCTTGATGGTGAAACGGCGGCGCCGCCGCCATGGCGTCGCGGTGGAGCACGAACGTCTGAGTTTG CCGAGCGCACCAAACCAGGTCTGGTCGATGGACTTCGTCTTCGATGCACTGAGCACCGGGCGACGGATCAAATGCCTGACGGTGGTCGATGACTTCACCA AGGAGTCGGTCGGCATCCTGGTGGAGCACGGTATCAGCGGCTTTCGTGTCACACGGGCGCTGGACGAGATGGCGCGGTTTCGCGGCTACCCGAAAGCGAT CCGCACCGACCAGGGGCCCGAGTTCACCGGCAAGGCACTCGATCAATGGGCCTATCAGCGCGACATCAAGCTGAAGCTGATTCAGCCTGGTAAGCCCACG CAGAATGCCTTCATCGAGTCGTTCAACGGTAAGTTCCGGGACGAATGCCTCAATGAGCACTGGTTCTGTTCGCTGGCCGAAGCGAGAATCCGCATTGCGG CCTGGCGGCGGGATTACAACGAACACCGACCGCACAGCGCGATTGGCAATCTCACCCCGGCAGAATTTGCTGCAAGTTGGCGAACTCGCCAGCAGCAACT GAAGCAGGAAAAATTAATATCAACCCCAGGGCCTACTAACTAG
BLASTN Search
|
DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
|
|
| DNA Sequence Downstream of Gene |
GCAGCGGTACTAAAACTGGGGGCAGGTCAATGGTGGCCAACAATTTTTCTGGAATACGCATCCGTTACCAGGCTTAGGTACAGCGGGCCGCTACTGGCTG GCAGGTAAGTAATGTCCGCCGCCCAAACATGCTCCGGTCCTGACGGGACAACCTGGTTCGGGCCTGACTTGAGTAGGTTCGGATGGCGGTAGAAGCGATG AAAGCTTTGTGTTGTCTTGTGATACGCCCGCTTGGGCAACACCAGCAAACGGCGCTCTCCCAGGACCTGAAATAGTCGGTCTCGGCCAATTTGGAGCCGC CTATCAGGCTGGCAATGCAGCAGATAGTGCAGCTTTCGTGCGCCTAGTCGTGGCTGACGTATCCGGATTTGTTGAACAAATTCGACAACCCGATCTGCCT GGCGTGCTTTGCTATCAGCAGCTCGATTGCGCTTGTAGTAAGCCTGTCGGCTCATGCCAAGAAACTGACAAGCCCTGGCAATGCTCAGTCCTGCGACTTG
|
|
| Amino Acid Sequence |
>hypothetical protein
MQARTGISERRACQLIGLSRSVLRYQPRASVQNTELQAQLVELAQERRRFGYRRLHILLRRAGVQVNHKRIYRLYRAAGLMVKRRRRRHGVAVEHERLSL PSAPNQVWSMDFVFDALSTGRRIKCLTVVDDFTKESVGILVEHGISGFRVTRALDEMARFRGYPKAIRTDQGPEFTGKALDQWAYQRDIKLKLIQPGKPT QNAFIESFNGKFRDECLNEHWFCSLAEARIRIAAWRRDYNEHRPHSAIGNLTPAEFAASWRTRQQQLKQEKLISTPGPTN
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
|