Strain | Pseudomonas aeruginosa 2192 supercont1.1 genomic scaffold, whole genome shotgun sequence. [Details] | |
DNA Sequence Upstream of Gene |
ACGTACCCAGCTTCACCCCGGTGGACGCCGTTTCCTGATATCCGGCCGCATGGCCGTTGATGCTTATTTCGTGATGGGGATCCCATGGCTCGTATTTTGA TTGTTGATGACTCTCCGACCGAGATGTACAAGCTGACCGCCATGCTGGAAAAGCATGGTCACCAGGTACTCAAGGCCGAGAACGGCGGCGACGGCGTCGC CCTGGCCCGCCAGGAAAAGCCCGACGTGGTCCTGATGGACATCGTCATGCCCGGCCTCAACGGCTTCCAGGCGACCCGTCAATTGACCAAGGACGCCGAG ACCAGCGCTATCCCGGTGATCATCGTCACCACCAAGGACCAGGAGACCGACAAGGTCTGGGGCAAGCGCCAGGGCGCTCGCGACTACCTGACCAAGCCGG TGGACGAAGAGACCCTGCTGAAAACCATCAATGCGGTGCTGGCGGGCTGAGCCCGTCGCAGCGCATCGCTCACCCTGACCCCGGAAAGACCAGGCCCCGC
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DNA Sequence for Gene |
>PA2G_04326
ATGTCGGACGTTCAGACCCCCTTCCAGCTCCTCGTCGACATCGATCAGCGCTGCCGACGCCTGGCCGCCGGCCTGCCGGCCCAGCAGGAGGCGGTGCAGA GCTGGAGCGGGATCGGCTTCCGCATGGGCGGGCGGTTCTTCGTCGCCCCCATGGGGGAGGTCGGCGAAGTCCTGCACGAACCGCGCTACACCCAGCTGCC GGGCGTGAAGACCTGGGTCAAGGGGGTGGCCAACGTACGTGGCCGCCTGCTGCCGATCATGGACCTCTGCGGTTTCCTCGGCACCGAACTGTCGCCCTTG CGCAAGCAGCGGCGGGTGCTGGTGGTGGAGCACCTGGACGTGTTCGCCGGCCTCATCGTCGATGAGGTGTTCGGCATGCAGCACTTCCCGGTGGACACCT TCAGCGAACAGCTGCCGCCACTAGAAGCGGCACTGCAACCCTTCATTCATGGCGTCTTCCATCGAGAGCAGCCGTGGCTGGTGTTCAGCCCGCATGCGCT GGCGCAACACCAGGGCTTCCTCGACGTCGCCGTATAA
BLASTN Search
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DIAMOND BLASTX Search (DIAMOND is faster than BLASTX)
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DNA Sequence Downstream of Gene |
ACAGCTTCACCGGTTGGGCCGGTCTGCCGGCCCGTGTCGTGACATGGAAATCGTAATCGTGGTCGGTCCGGGCGGGGGCCAAATATGAAGAAAATCAACG CAGGCAATCTTTTCGCGGGCATGCGCAGCAGCTCGGTGATCGCGGGGCTGTTCATCGTCCTCATCGTCTCGATCGTGTTGCTGTTCGCCAACTTTGCCTA CCTCAACACCCAGTCGAACCATGACAAGCAGTACATCGGCCATGCCGGCGAACTGCGCGTCCTGTCGCAGCGGATCGCGAAGAACGCCACCGAAGCGGCG GCGGGCAAGGGCGAGGCGTTCAAGCTCCTGAAGGATGCGCGCAACGACTTCGAGAAACGCTGGAACATCCTGGTCAACGGCGACGAGAGCACATCCCTGC CGCCCAGCCCCGAAGCGGTGAAGCCGCAGATGGACGTGGTGCAGCAGGACTGGGATGGCCTGCGCAAGAACGCCGACTCCATCCTCGCCAGCGAACAGAC
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Amino Acid Sequence |
>protein PilI
MSDVQTPFQLLVDIDQRCRRLAAGLPAQQEAVQSWSGIGFRMGGRFFVAPMGEVGEVLHEPRYTQLPGVKTWVKGVANVRGRLLPIMDLCGFLGTELSPL RKQRRVLVVEHLDVFAGLIVDEVFGMQHFPVDTFSEQLPPLEAALQPFIHGVFHREQPWLVFSPHALAQHQGFLDVAV
BLASTP |
DIAMOND BLASTP (DIAMOND is faster than BLASTP)
Search for conserved domains in this protein at NCBI CDD site
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